Strain Fitness in Shewanella loihica PV-4 around Shew_2560

Experiment: Thallium(I) acetate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 10 mg/ml
3,015,998	+		Shew_2558	0.83	-0.3
3,016,134	-				+0.6
3,016,137	+				+0.6
3,016,266	+				+0.3
3,016,296	+		Shew_2559	0.14	+0.4
3,016,609	-		Shew_2559	0.72	+0.4
3,016,635	+		Shew_2559	0.77	+0.2
3,017,202	-		Shew_2560	0.17	+0.0
3,017,431	+		Shew_2560	0.32	-0.3
3,017,431	+		Shew_2560	0.32	+0.4
3,017,531	-		Shew_2560	0.39	-0.1
3,017,566	-		Shew_2560	0.41	-0.1
3,017,745	+		Shew_2560	0.53	-0.3
3,017,815	+		Shew_2560	0.57	+0.0
3,017,825	+		Shew_2560	0.58	-0.1
3,017,825	+		Shew_2560	0.58	+0.1
3,017,825	+		Shew_2560	0.58	+0.5
3,017,833	-		Shew_2560	0.58	-0.8
3,017,833	-		Shew_2560	0.58	-0.3
3,017,982	+		Shew_2560	0.68	-3.4
3,017,982	+		Shew_2560	0.68	+0.1
3,017,982	+		Shew_2560	0.68	-0.2
3,017,982	+		Shew_2560	0.68	-1.0
3,017,990	-		Shew_2560	0.69	-3.6
3,017,990	-		Shew_2560	0.69	+0.3
3,018,013	+		Shew_2560	0.70	+1.5
3,018,013	+		Shew_2560	0.70	+1.3
3,018,018	+		Shew_2560	0.70	-1.0
3,018,021	-		Shew_2560	0.71	+0.5
3,018,084	+		Shew_2560	0.75	+0.3
3,018,094	-		Shew_2560	0.75	+1.0
3,018,341	-				+0.2
3,018,624	+				-1.3
3,018,632	-				-0.1
3,018,772	+		Shew_2561	0.14	-1.9
3,018,804	+		Shew_2561	0.16	-0.1
3,019,147	+		Shew_2561	0.39	-2.2
3,019,147	+		Shew_2561	0.39	-0.0
3,019,168	+		Shew_2561	0.40	-2.3
3,019,225	-		Shew_2561	0.44	-0.3
3,019,225	-		Shew_2561	0.44	-0.7
3,019,388	-		Shew_2561	0.54	+0.1