Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_2465 and Shew_2466 are separated by 3 nucleotides Shew_2466 and Shew_2467 are separated by 125 nucleotides Shew_2467 and Shew_2468 are separated by 32 nucleotides Shew_2468 and Shew_2469 are separated by 48 nucleotides
Shew_2465: Shew_2465 - LysR family transcriptional regulator (RefSeq), at 2,901,238 to 2,902,167
_2465
Shew_2466: Shew_2466 - hypothetical protein (RefSeq), at 2,902,171 to 2,904,141
_2466
Shew_2467: Shew_2467 - hypothetical protein (RefSeq), at 2,904,267 to 2,904,653
_2467
Shew_2468: Shew_2468 - RNA-binding S4 domain-containing protein (RefSeq), at 2,904,686 to 2,904,916
_2468
Shew_2469: Shew_2469 - GCN5-related N-acetyltransferase (RefSeq), at 2,904,965 to 2,905,513
_2469
Position (kb)
2902
2903
2904
2905 Strain fitness (log2 ratio)
-1
0
1 at 2902.248 kb on - strand at 2902.256 kb on - strand at 2902.353 kb on + strand at 2902.393 kb on + strand, within Shew_2466 at 2902.476 kb on - strand, within Shew_2466 at 2902.507 kb on - strand, within Shew_2466 at 2902.627 kb on + strand, within Shew_2466 at 2902.762 kb on + strand, within Shew_2466 at 2902.789 kb on - strand, within Shew_2466 at 2902.841 kb on + strand, within Shew_2466 at 2903.306 kb on - strand, within Shew_2466 at 2903.526 kb on + strand, within Shew_2466 at 2903.526 kb on + strand, within Shew_2466 at 2903.950 kb on - strand at 2904.157 kb on - strand at 2905.140 kb on + strand, within Shew_2469
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 2,902,248 - +0.2 2,902,256 - +0.1 2,902,353 + +1.2 2,902,393 + Shew_2466 0.11 +0.4 2,902,476 - Shew_2466 0.15 +0.1 2,902,507 - Shew_2466 0.17 +0.7 2,902,627 + Shew_2466 0.23 +0.8 2,902,762 + Shew_2466 0.30 +0.9 2,902,789 - Shew_2466 0.31 +1.2 2,902,841 + Shew_2466 0.34 +0.6 2,903,306 - Shew_2466 0.58 +0.4 2,903,526 + Shew_2466 0.69 +0.9 2,903,526 + Shew_2466 0.69 +0.5 2,903,950 - +0.6 2,904,157 - +0.3 2,905,140 + Shew_2469 0.32 -1.6
Or see this region's nucleotide sequence