Strain Fitness in Shewanella loihica PV-4 around Shew_2448
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,876,623 | - | Shew_2447 | 0.10 | +0.1 | |
| 2,876,719 | + | Shew_2447 | 0.37 | -0.4 | |
| 2,876,722 | - | Shew_2447 | 0.38 | -0.2 | |
| 2,876,739 | - | Shew_2447 | 0.43 | -0.5 | |
| 2,876,752 | - | Shew_2447 | 0.46 | -0.3 | |
| 2,877,294 | - | nrdG | Shew_2448 | 0.41 | +0.8 |
| 2,877,690 | - | +0.4 | |||
| 2,877,783 | + | +0.2 | |||
| 2,877,810 | + | -0.9 | |||
| 2,878,274 | - | Shew_2449 | 0.27 | -0.0 | |
| 2,878,500 | - | Shew_2449 | 0.38 | +0.3 |
Or see this region's nucleotide sequence