Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_2428 and Shew_2429 are separated by 0 nucleotides Shew_2429 and Shew_2430 overlap by 13 nucleotides Shew_2430 and Shew_2431 overlap by 4 nucleotides
Shew_2428: Shew_2428 - hypothetical protein (RefSeq), at 2,854,129 to 2,855,058
_2428
Shew_2429: Shew_2429 - hypothetical protein (RefSeq), at 2,855,059 to 2,855,553
_2429
Shew_2430: Shew_2430 - von Willebrand factor, type A (RefSeq), at 2,855,541 to 2,856,560
_2430
Shew_2431: Shew_2431 - TPR repeat-containing protein (RefSeq), at 2,856,557 to 2,858,638
_2431
Position (kb)
2855
2856
2857 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2854.742 kb on - strand, within Shew_2428 at 2854.911 kb on - strand, within Shew_2428 at 2855.116 kb on - strand, within Shew_2429 at 2855.525 kb on - strand at 2855.546 kb on - strand at 2855.805 kb on + strand, within Shew_2430 at 2856.167 kb on + strand, within Shew_2430 at 2856.231 kb on - strand, within Shew_2430 at 2856.231 kb on - strand, within Shew_2430 at 2856.906 kb on - strand, within Shew_2431 at 2856.944 kb on + strand, within Shew_2431 at 2857.047 kb on - strand, within Shew_2431 at 2857.114 kb on + strand, within Shew_2431
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 2,854,742 - Shew_2428 0.66 -1.9 2,854,911 - Shew_2428 0.84 -3.9 2,855,116 - Shew_2429 0.12 -2.5 2,855,525 - -3.5 2,855,546 - -2.1 2,855,805 + Shew_2430 0.26 -4.5 2,856,167 + Shew_2430 0.61 -3.4 2,856,231 - Shew_2430 0.68 -2.8 2,856,231 - Shew_2430 0.68 -4.1 2,856,906 - Shew_2431 0.17 -3.7 2,856,944 + Shew_2431 0.19 -3.1 2,857,047 - Shew_2431 0.24 -3.3 2,857,114 + Shew_2431 0.27 -2.7
Or see this region's nucleotide sequence