Strain Fitness in Shewanella loihica PV-4 around Shew_2430
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,854,742 | - | Shew_2428 | 0.66 | -1.9 | |
2,854,911 | - | Shew_2428 | 0.84 | -3.9 | |
2,855,116 | - | Shew_2429 | 0.12 | -2.5 | |
2,855,525 | - | -3.5 | |||
2,855,546 | - | -2.1 | |||
2,855,805 | + | Shew_2430 | 0.26 | -4.5 | |
2,856,167 | + | Shew_2430 | 0.61 | -3.4 | |
2,856,231 | - | Shew_2430 | 0.68 | -2.8 | |
2,856,231 | - | Shew_2430 | 0.68 | -4.1 | |
2,856,906 | - | Shew_2431 | 0.17 | -3.7 | |
2,856,944 | + | Shew_2431 | 0.19 | -3.1 | |
2,857,047 | - | Shew_2431 | 0.24 | -3.3 | |
2,857,114 | + | Shew_2431 | 0.27 | -2.7 |
Or see this region's nucleotide sequence