Strain Fitness in Shewanella loihica PV-4 around Shew_2390

Experiment: Thallium(I) acetate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 10 mg/ml
2,801,587	+		Shew_2389	0.77	+2.2
2,801,595	-		Shew_2389	0.78	-0.1
2,801,667	+		Shew_2389	0.83	-0.3
2,801,768	-		Shew_2389	0.89	-1.7
2,801,980	+				-0.2
2,801,980	+				+1.2
2,801,988	-				-0.7
2,801,988	-				+0.3
2,802,323	+				+0.8
2,802,956	+		Shew_2390	0.20	-1.2
2,802,964	-		Shew_2390	0.20	+1.7
2,802,998	-		Shew_2390	0.22	-0.2
2,803,176	+		Shew_2390	0.30	-1.0
2,803,481	-		Shew_2390	0.43	-0.3
2,803,608	-		Shew_2390	0.49	-0.7
2,803,625	-		Shew_2390	0.49	-1.3
2,803,682	+		Shew_2390	0.52	-0.4
2,803,985	-		Shew_2390	0.65	-2.4
2,804,127	+		Shew_2390	0.71	+0.5
2,804,127	+		Shew_2390	0.71	+0.6
2,804,495	-		Shew_2390	0.88	-0.6
2,804,495	-		Shew_2390	0.88	-1.0
2,804,551	-				-0.7
2,804,663	-				-0.5
2,804,720	-				-1.9
2,805,149	+	pflA	Shew_2391	0.36	-1.6
2,805,154	+	pflA	Shew_2391	0.37	-1.1
2,805,162	-	pflA	Shew_2391	0.38	-1.7
2,805,162	-	pflA	Shew_2391	0.38	+0.1
2,805,183	+	pflA	Shew_2391	0.41	-2.8