Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_2218 and Shew_2219 are separated by 58 nucleotides Shew_2219 and Shew_2220 are separated by 58 nucleotides Shew_2220 and Shew_2221 are separated by 17 nucleotides Shew_2221 and Shew_2222 are separated by 93 nucleotides
Shew_2218: Shew_2218 - signal transduction histidine kinase regulating citrate/malate metabolism (RefSeq), at 2,589,005 to 2,591,644
_2218
Shew_2219: Shew_2219 - hypothetical protein (RefSeq), at 2,591,703 to 2,592,629
_2219
Shew_2220: Shew_2220 - hypothetical protein (RefSeq), at 2,592,688 to 2,593,062
_2220
Shew_2221: Shew_2221 - hypothetical protein (RefSeq), at 2,593,080 to 2,593,373
_2221
Shew_2222: Shew_2222 - hypothetical protein (RefSeq), at 2,593,467 to 2,593,817
_2222
Position (kb)
2591
2592
2593 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2590.715 kb on + strand, within Shew_2218 at 2591.284 kb on + strand, within Shew_2218 at 2591.800 kb on + strand, within Shew_2219 at 2591.859 kb on + strand, within Shew_2219 at 2591.867 kb on - strand, within Shew_2219 at 2591.867 kb on - strand, within Shew_2219 at 2592.423 kb on + strand, within Shew_2219 at 2593.629 kb on + strand, within Shew_2222
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 2,590,715 + Shew_2218 0.65 +0.1 2,591,284 + Shew_2218 0.86 +0.2 2,591,800 + Shew_2219 0.10 -2.1 2,591,859 + Shew_2219 0.17 -2.5 2,591,867 - Shew_2219 0.18 +0.6 2,591,867 - Shew_2219 0.18 -3.3 2,592,423 + Shew_2219 0.78 -2.9 2,593,629 + Shew_2222 0.46 -2.1
Or see this region's nucleotide sequence