Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_2183 and Shew_2184 are separated by 126 nucleotides Shew_2184 and Shew_2185 are separated by 24 nucleotides Shew_2185 and Shew_2186 are separated by 2 nucleotides Shew_2186 and Shew_2187 are separated by 109 nucleotides
Shew_2183: Shew_2183 - hypothetical protein (RefSeq), at 2,543,261 to 2,543,542
_2183
Shew_2184: Shew_2184 - septum site-determining protein MinC (RefSeq), at 2,543,669 to 2,544,334
_2184
Shew_2185: Shew_2185 - septum site-determining protein MinD (RefSeq), at 2,544,359 to 2,545,168
_2185
Shew_2186: Shew_2186 - cell division topological specificity factor MinE (RefSeq), at 2,545,171 to 2,545,431
_2186
Shew_2187: Shew_2187 - ribonuclease D (RefSeq), at 2,545,541 to 2,546,647
_2187
Position (kb)
2544
2545
2546 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2543.522 kb on + strand at 2543.522 kb on + strand at 2543.522 kb on + strand at 2543.522 kb on + strand at 2543.530 kb on - strand at 2543.530 kb on - strand at 2543.591 kb on + strand at 2543.597 kb on - strand at 2543.599 kb on - strand at 2543.631 kb on + strand at 2543.733 kb on - strand at 2543.943 kb on - strand, within Shew_2184 at 2543.943 kb on - strand, within Shew_2184 at 2544.294 kb on - strand at 2544.398 kb on - strand at 2544.527 kb on + strand, within Shew_2185 at 2544.872 kb on - strand, within Shew_2185 at 2544.872 kb on - strand, within Shew_2185 at 2545.066 kb on + strand, within Shew_2185 at 2545.834 kb on + strand, within Shew_2187 at 2546.011 kb on + strand, within Shew_2187 at 2546.152 kb on + strand, within Shew_2187
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 2,543,522 + -2.6 2,543,522 + -2.0 2,543,522 + -1.3 2,543,522 + -0.5 2,543,530 - -2.0 2,543,530 - -0.0 2,543,591 + +1.9 2,543,597 - +1.2 2,543,599 - -0.4 2,543,631 + +1.6 2,543,733 - -0.1 2,543,943 - Shew_2184 0.41 +0.4 2,543,943 - Shew_2184 0.41 +0.7 2,544,294 - +3.4 2,544,398 - +2.4 2,544,527 + Shew_2185 0.21 +1.4 2,544,872 - Shew_2185 0.63 +1.0 2,544,872 - Shew_2185 0.63 +0.3 2,545,066 + Shew_2185 0.87 +1.2 2,545,834 + Shew_2187 0.26 -1.7 2,546,011 + Shew_2187 0.42 -2.4 2,546,152 + Shew_2187 0.55 -0.8
Or see this region's nucleotide sequence