Strain Fitness in Shewanella loihica PV-4 around Shew_1979
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,288,314 | + | -0.8 | |||
| 2,288,322 | - | +0.1 | |||
| 2,288,322 | - | +1.3 | |||
| 2,288,836 | + | Shew_1978 | 0.56 | -0.9 | |
| 2,289,490 | + | Shew_1979 | 0.19 | +1.3 | |
| 2,289,912 | + | Shew_1979 | 0.64 | +0.2 | |
| 2,290,278 | + | +1.7 | |||
| 2,290,738 | - | Shew_1980 | 0.54 | -0.1 | |
| 2,291,120 | + | Shew_1981 | 0.10 | +0.1 |
Or see this region's nucleotide sequence