Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_1975 and Shew_1976 are separated by 91 nucleotides Shew_1976 and Shew_1977 are separated by 312 nucleotides
Shew_1975: Shew_1975 - putative manganese-dependent inorganic pyrophosphatase (RefSeq), at 2,283,239 to 2,284,159
_1975
Shew_1976: Shew_1976 - putative ATP-dependent protease La-relatedprotein (RefSeq), at 2,284,251 to 2,286,653
_1976
Shew_1977: Shew_1977 - diguanylate cyclase with PAS/PAC sensor (RefSeq), at 2,286,966 to 2,287,901
_1977
Position (kb)
2284
2285
2286
2287 Strain fitness (log2 ratio)
-1
0
1 at 2284.576 kb on + strand, within Shew_1976 at 2284.661 kb on - strand, within Shew_1976 at 2284.731 kb on - strand, within Shew_1976 at 2284.834 kb on - strand, within Shew_1976 at 2284.944 kb on - strand, within Shew_1976 at 2284.959 kb on + strand, within Shew_1976 at 2285.657 kb on - strand, within Shew_1976 at 2285.840 kb on + strand, within Shew_1976 at 2285.904 kb on + strand, within Shew_1976 at 2285.999 kb on + strand, within Shew_1976 at 2286.039 kb on - strand, within Shew_1976 at 2286.076 kb on + strand, within Shew_1976 at 2286.169 kb on + strand, within Shew_1976 at 2286.260 kb on - strand, within Shew_1976 at 2286.318 kb on - strand, within Shew_1976 at 2286.341 kb on + strand, within Shew_1976 at 2286.341 kb on + strand, within Shew_1976 at 2286.910 kb on + strand at 2287.343 kb on - strand, within Shew_1977 at 2287.474 kb on + strand, within Shew_1977 at 2287.509 kb on - strand, within Shew_1977
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 2,284,576 + Shew_1976 0.14 +0.8 2,284,661 - Shew_1976 0.17 -0.4 2,284,731 - Shew_1976 0.20 +0.8 2,284,834 - Shew_1976 0.24 +0.4 2,284,944 - Shew_1976 0.29 +0.8 2,284,959 + Shew_1976 0.29 +0.6 2,285,657 - Shew_1976 0.59 -0.2 2,285,840 + Shew_1976 0.66 +1.0 2,285,904 + Shew_1976 0.69 +0.6 2,285,999 + Shew_1976 0.73 +0.6 2,286,039 - Shew_1976 0.74 -0.1 2,286,076 + Shew_1976 0.76 +0.2 2,286,169 + Shew_1976 0.80 -0.1 2,286,260 - Shew_1976 0.84 +0.5 2,286,318 - Shew_1976 0.86 +0.5 2,286,341 + Shew_1976 0.87 +1.3 2,286,341 + Shew_1976 0.87 +0.4 2,286,910 + -1.4 2,287,343 - Shew_1977 0.40 -0.0 2,287,474 + Shew_1977 0.54 +0.3 2,287,509 - Shew_1977 0.58 +0.3
Or see this region's nucleotide sequence