Strain Fitness in Shewanella loihica PV-4 around Shew_1889

Experiment: Thallium(I) acetate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 10 mg/ml
2,178,101	-		Shew_1888	0.87	-0.1
2,178,450	-				+1.6
2,178,508	-				+0.5
2,178,525	-				+0.3
2,178,903	-				+1.1
2,179,282	+		Shew_1889	0.20	+1.6
2,179,335	+		Shew_1889	0.23	+1.9
2,179,363	-		Shew_1889	0.25	+1.7
2,179,498	-		Shew_1889	0.33	+2.3
2,179,596	+		Shew_1889	0.39	+0.7
2,179,643	-		Shew_1889	0.42	+1.4
2,179,816	-		Shew_1889	0.52	+1.2
2,179,924	-		Shew_1889	0.59	+1.0
2,180,184	-		Shew_1889	0.75	+0.7
2,180,443	-				+2.2
2,180,443	-				+1.2
2,180,480	-				+1.1
2,180,528	-				+2.0
2,180,719	+				-0.7
2,180,719	+				+0.1
2,181,013	-		Shew_1890	0.22	+0.0
2,181,028	-		Shew_1890	0.24	+0.3
2,181,146	+		Shew_1890	0.33	+0.5
2,181,177	+		Shew_1890	0.35	+0.2
2,181,562	+		Shew_1890	0.66	-0.6