Strain Fitness in Shewanella loihica PV-4 around Shew_1822
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,094,445 | + | Shew_1821 | 0.42 | +0.8 | |
2,094,804 | - | Shew_1821 | 0.74 | +0.5 | |
2,095,654 | - | Shew_1822 | 0.18 | -2.9 | |
2,096,152 | + | Shew_1822 | 0.38 | -1.8 | |
2,096,160 | - | Shew_1822 | 0.38 | -2.0 | |
2,096,516 | - | Shew_1822 | 0.52 | -1.0 | |
2,096,517 | - | Shew_1822 | 0.52 | -2.0 | |
2,098,738 | - | Shew_1823 | 0.78 | -2.9 |
Or see this region's nucleotide sequence