Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_1802 and Shew_1803 are separated by 72 nucleotides Shew_1803 and Shew_1804 are separated by 144 nucleotides Shew_1804 and Shew_1805 are separated by 325 nucleotides
Shew_1802: Shew_1802 - carboxy-terminal protease (RefSeq), at 2,062,300 to 2,064,345
_1802
Shew_1803: Shew_1803 - aminopeptidase N (RefSeq), at 2,064,418 to 2,066,979
_1803
Shew_1804: Shew_1804 - hypothetical protein (RefSeq), at 2,067,124 to 2,067,378
_1804
Shew_1805: Shew_1805 - hypothetical protein (RefSeq), at 2,067,704 to 2,069,752
_1805
Position (kb)
2064
2065
2066
2067 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2063.561 kb on + strand, within Shew_1802 at 2063.868 kb on + strand, within Shew_1802 at 2063.876 kb on - strand, within Shew_1802 at 2064.566 kb on + strand at 2064.566 kb on + strand at 2064.574 kb on - strand at 2064.574 kb on - strand at 2064.768 kb on + strand, within Shew_1803 at 2065.079 kb on - strand, within Shew_1803 at 2065.263 kb on + strand, within Shew_1803 at 2065.299 kb on - strand, within Shew_1803 at 2065.416 kb on - strand, within Shew_1803 at 2065.708 kb on - strand, within Shew_1803 at 2065.724 kb on - strand, within Shew_1803 at 2065.977 kb on - strand, within Shew_1803 at 2066.212 kb on + strand, within Shew_1803 at 2066.241 kb on - strand, within Shew_1803 at 2066.545 kb on - strand, within Shew_1803 at 2067.035 kb on - strand at 2067.112 kb on - strand at 2067.256 kb on + strand, within Shew_1804 at 2067.769 kb on - strand at 2067.776 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 2,063,561 + Shew_1802 0.62 -3.2 2,063,868 + Shew_1802 0.77 -3.0 2,063,876 - Shew_1802 0.77 -2.4 2,064,566 + +0.9 2,064,566 + +0.9 2,064,574 - +1.7 2,064,574 - +0.3 2,064,768 + Shew_1803 0.14 -0.0 2,065,079 - Shew_1803 0.26 +0.6 2,065,263 + Shew_1803 0.33 +0.9 2,065,299 - Shew_1803 0.34 -1.0 2,065,416 - Shew_1803 0.39 +0.6 2,065,708 - Shew_1803 0.50 +1.3 2,065,724 - Shew_1803 0.51 -0.5 2,065,977 - Shew_1803 0.61 +0.3 2,066,212 + Shew_1803 0.70 +0.4 2,066,241 - Shew_1803 0.71 +0.7 2,066,545 - Shew_1803 0.83 +0.2 2,067,035 - +0.0 2,067,112 - +1.0 2,067,256 + Shew_1804 0.52 -0.4 2,067,769 - -0.3 2,067,776 - -0.1
Or see this region's nucleotide sequence