Strain Fitness in Shewanella loihica PV-4 around Shew_1750

Experiment: Thallium(I) acetate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 10 mg/ml
1,998,546	+				+0.3
1,998,791	-				+0.3
1,998,803	-				-0.2
1,998,935	-				+1.0
1,998,982	+				+0.2
1,999,148	-		Shew_1750	0.18	+0.4
1,999,148	+		Shew_1750	0.18	-0.4
1,999,186	-		Shew_1750	0.29	+0.5
1,999,248	+		Shew_1750	0.46	-2.0
1,999,255	+		Shew_1750	0.48	+0.3
1,999,255	+		Shew_1750	0.48	+1.6
1,999,256	-		Shew_1750	0.49	+0.4
1,999,256	-		Shew_1750	0.49	-0.2
1,999,258	-		Shew_1750	0.49	-1.4
1,999,320	+		Shew_1750	0.67	+0.6
1,999,358	+		Shew_1750	0.78	-0.8
1,999,358	+		Shew_1750	0.78	-0.8
1,999,358	+		Shew_1750	0.78	-0.1
1,999,366	-		Shew_1750	0.80	-0.6
1,999,393	-		Shew_1750	0.88	-0.6
1,999,411	+				-1.0
1,999,411	+				-3.6
1,999,417	+				+1.0
1,999,425	+				-2.4
1,999,433	+				-0.4
1,999,433	+				-0.1
1,999,433	+				-2.5
1,999,433	+				+0.3
1,999,441	-				+0.7
1,999,441	-				-0.4
1,999,441	-				+0.0
1,999,441	-				+0.7
1,999,441	-				-1.3
1,999,441	-				+0.6
1,999,446	+				+1.0
1,999,466	+				+0.4
1,999,488	+				+0.8
1,999,511	+				+1.3
1,999,521	+				-1.6
1,999,521	+				-0.4
1,999,521	+				+1.3
1,999,521	+				-0.3
1,999,527	+				-0.5
1,999,527	+				+0.0
1,999,529	-				+0.4
1,999,529	+				+0.3
1,999,529	-				+0.3
1,999,535	-				-0.4
1,999,536	-				+0.6
1,999,537	-				+0.3
1,999,537	-				-0.6
1,999,537	-				+0.6
1,999,542	+				-1.4
1,999,542	+				-0.4
1,999,550	-				-0.6
1,999,558	+				+0.4
1,999,572	+				+0.3
1,999,572	+				+1.6
1,999,580	-				+0.1
1,999,580	-				+0.1
1,999,636	+				-0.2
1,999,636	+				+0.7
1,999,636	+				-0.5
1,999,636	+				+0.2
1,999,636	+				+0.7
1,999,636	+				-0.4
1,999,641	+				+1.2
1,999,644	-				+0.6
1,999,644	-				-2.4
1,999,659	-				+0.8
1,999,686	+				+0.2
1,999,687	+				-0.5
1,999,687	+				+0.2
1,999,687	+				+0.7
1,999,687	+				+0.7
1,999,687	+				-0.4
1,999,687	+				-0.6
1,999,687	+				+0.4
1,999,687	+				+0.4
1,999,687	+				+0.8
1,999,687	+				-0.2
1,999,687	+				-0.9
1,999,687	+				-0.2
1,999,687	+				-0.3
1,999,695	-				+0.4
1,999,695	-				+0.3
1,999,695	-				+0.4
1,999,695	-				+1.2
1,999,695	-				+1.7
1,999,695	-				+0.3
1,999,695	-				+0.1
1,999,695	-				+0.8
1,999,695	-				+0.1
1,999,695	-				+0.3
1,999,695	-				+0.8
1,999,696	-				-0.4
1,999,702	-				+0.8
1,999,738	-				-2.0
1,999,754	-				-1.6
1,999,756	+				+0.4
1,999,763	+				+0.6
1,999,764	-				+1.2
1,999,766	-				+0.2
1,999,771	-				-1.3
1,999,776	-				+0.0
1,999,776	-				+0.4
1,999,841	+				+0.1
1,999,841	+				+0.4
1,999,846	-				-0.3
1,999,849	-				+0.1
1,999,868	-				+0.6
1,999,868	-				+0.7
1,999,880	+				-0.1
1,999,880	+				+1.3
1,999,881	-				-0.0
1,999,881	-				+0.2
1,999,882	-				+0.6
1,999,888	-				+0.8
1,999,888	-				-0.7
1,999,888	-				+0.1
1,999,888	-				+1.4
1,999,888	-				+2.4
1,999,894	+		Shew_1751	0.10	-1.2
1,999,895	+		Shew_1751	0.10	+0.9
1,999,902	-		Shew_1751	0.11	-0.6
1,999,902	-		Shew_1751	0.11	-1.4
1,999,902	-		Shew_1751	0.11	+0.3
1,999,923	+		Shew_1751	0.12	-2.2
1,999,923	+		Shew_1751	0.12	+1.2
1,999,962	+		Shew_1751	0.15	-1.2
2,000,008	+		Shew_1751	0.18	-0.3
2,000,008	+		Shew_1751	0.18	+0.2
2,000,008	+		Shew_1751	0.18	-1.0
2,000,008	+		Shew_1751	0.18	+0.2
2,000,016	-		Shew_1751	0.18	-0.2
2,000,036	-		Shew_1751	0.20	-0.2
2,000,039	+		Shew_1751	0.20	+0.1
2,000,062	-		Shew_1751	0.21	-2.9
2,000,078	+		Shew_1751	0.22	+0.1
2,000,086	-		Shew_1751	0.23	-0.4
2,000,087	-		Shew_1751	0.23	+0.8
2,000,164	+		Shew_1751	0.28	-0.2
2,000,206	+		Shew_1751	0.31	+0.2
2,000,223	+		Shew_1751	0.32	+0.6
2,000,224	+		Shew_1751	0.32	+0.5
2,000,240	+		Shew_1751	0.33	+0.1
2,000,245	+		Shew_1751	0.33	-0.4
2,000,245	+		Shew_1751	0.33	-0.5
2,000,281	+		Shew_1751	0.36	-1.2
2,000,291	-		Shew_1751	0.36	+0.6
2,000,336	+		Shew_1751	0.39	-0.8
2,000,375	+		Shew_1751	0.42	-1.6
2,000,376	+		Shew_1751	0.42	-0.2
2,000,376	+		Shew_1751	0.42	+0.1
2,000,384	-		Shew_1751	0.42	-0.3
2,000,384	-		Shew_1751	0.42	-0.4
2,000,404	+		Shew_1751	0.44	+1.2
2,000,412	+		Shew_1751	0.44	-0.1
2,000,416	+		Shew_1751	0.44	-2.0
2,000,416	+		Shew_1751	0.44	+0.4
2,000,424	-		Shew_1751	0.45	-1.4
2,000,432	+		Shew_1751	0.45	+0.8