Strain Fitness in Shewanella loihica PV-4 around Shew_1670
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,919,184 | + | Shew_1669 | 0.22 | +0.7 | |
1,919,291 | + | Shew_1669 | 0.31 | +0.8 | |
1,919,299 | - | Shew_1669 | 0.32 | +0.8 | |
1,919,352 | - | Shew_1669 | 0.36 | +0.2 | |
1,919,371 | - | Shew_1669 | 0.38 | +0.3 | |
1,919,681 | - | Shew_1669 | 0.65 | +0.8 | |
1,919,720 | - | Shew_1669 | 0.68 | +2.1 | |
1,920,249 | + | Shew_1670 | 0.18 | +1.0 | |
1,920,249 | + | Shew_1670 | 0.18 | +0.1 | |
1,920,533 | + | Shew_1670 | 0.55 | +0.3 | |
1,920,541 | - | Shew_1670 | 0.56 | +0.8 | |
1,920,627 | - | Shew_1670 | 0.67 | -0.2 | |
1,920,876 | + | +0.2 | |||
1,921,113 | + | Shew_1671 | 0.21 | -0.9 | |
1,921,789 | - | Shew_1671 | 0.80 | +0.2 |
Or see this region's nucleotide sequence