Strain Fitness in Shewanella loihica PV-4 around Shew_1517
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,739,083 | - | +2.2 | |||
1,739,093 | - | +1.6 | |||
1,739,164 | + | +0.0 | |||
1,739,387 | + | +0.8 | |||
1,740,325 | + | Shew_1517 | 0.42 | -0.4 | |
1,740,421 | - | Shew_1517 | 0.59 | -2.1 | |
1,740,421 | - | Shew_1517 | 0.59 | +0.5 | |
1,740,612 | + | +0.4 | |||
1,740,839 | + | -0.0 | |||
1,741,011 | + | +0.4 | |||
1,741,595 | - | Shew_1518 | 0.87 | +0.9 | |
1,741,613 | + | Shew_1518 | 0.90 | +2.1 |
Or see this region's nucleotide sequence