Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_1502 and Shew_1503 are separated by 170 nucleotides Shew_1503 and Shew_1504 are separated by 131 nucleotides Shew_1504 and Shew_1505 are separated by 71 nucleotides
Shew_1502: Shew_1502 - hypothetical protein (RefSeq), at 1,722,475 to 1,725,834
_1502
Shew_1503: Shew_1503 - oxidoreductase FAD-binding subunit (RefSeq), at 1,726,005 to 1,726,997
_1503
Shew_1504: Shew_1504 - GCN5-related N-acetyltransferase (RefSeq), at 1,727,129 to 1,727,560
_1504
Shew_1505: Shew_1505 - hypothetical protein (RefSeq), at 1,727,632 to 1,728,336
_1505
Position (kb) 1726
1727 Strain fitness (log2 ratio) -1
0
1
2 at 1725.425 kb on - strand, within Shew_1502 at 1725.501 kb on - strand at 1725.892 kb on + strand at 1726.012 kb on + strand at 1726.067 kb on - strand at 1726.067 kb on - strand at 1726.183 kb on + strand, within Shew_1503 at 1727.004 kb on - strand at 1727.192 kb on + strand, within Shew_1504 at 1727.712 kb on - strand, within Shew_1505 at 1727.827 kb on - strand, within Shew_1505 at 1727.829 kb on + strand, within Shew_1505 at 1727.837 kb on - strand, within Shew_1505
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 1,725,425 - Shew_1502 0.88 -1.2 1,725,501 - +1.9 1,725,892 + -0.1 1,726,012 + -0.4 1,726,067 - +1.0 1,726,067 - -1.6 1,726,183 + Shew_1503 0.18 +0.4 1,727,004 - +0.6 1,727,192 + Shew_1504 0.15 +0.1 1,727,712 - Shew_1505 0.11 -0.4 1,727,827 - Shew_1505 0.28 -0.3 1,727,829 + Shew_1505 0.28 +0.0 1,727,837 - Shew_1505 0.29 +0.8
Or see this region's nucleotide sequence