Strain Fitness in Shewanella loihica PV-4 around Shew_1245
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,443,117 | + | -0.6 | |||
1,443,125 | - | +0.1 | |||
1,443,131 | - | +0.7 | |||
1,443,183 | + | -0.3 | |||
1,443,183 | + | +0.1 | |||
1,443,424 | + | +0.4 | |||
1,443,791 | + | Shew_1244 | 0.86 | -1.7 | |
1,443,811 | + | +0.0 | |||
1,443,906 | + | +0.4 | |||
1,444,133 | + | Shew_1245 | 0.23 | +0.7 | |
1,444,160 | + | Shew_1245 | 0.26 | -0.2 | |
1,444,692 | - | Shew_1245 | 0.82 | +0.6 | |
1,444,692 | - | Shew_1245 | 0.82 | +0.4 | |
1,444,740 | + | Shew_1245 | 0.87 | -0.7 | |
1,445,214 | - | Shew_1246 | 0.87 | -0.6 | |
1,445,296 | + | +0.2 | |||
1,445,507 | - | Shew_1247 | 0.28 | -1.4 | |
1,445,615 | - | Shew_1247 | 0.39 | +0.6 | |
1,445,780 | - | Shew_1247 | 0.57 | -0.3 | |
1,445,820 | + | Shew_1247 | 0.61 | +0.5 |
Or see this region's nucleotide sequence