Strain Fitness in Shewanella loihica PV-4 around Shew_1222
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,419,937 | + | Shew_1221 | 0.50 | -0.3 | |
1,419,955 | + | Shew_1221 | 0.52 | -0.0 | |
1,419,955 | + | Shew_1221 | 0.52 | +0.3 | |
1,419,980 | - | Shew_1221 | 0.54 | +0.3 | |
1,420,573 | + | -0.5 | |||
1,420,581 | - | +0.7 | |||
1,420,690 | - | -0.4 | |||
1,420,975 | - | Shew_1222 | 0.59 | -0.6 | |
1,421,139 | + | Shew_1223 | 0.32 | -0.4 | |
1,421,575 | + | Shew_1224 | 0.14 | -0.2 | |
1,421,705 | + | Shew_1224 | 0.25 | -0.2 | |
1,421,713 | - | Shew_1224 | 0.25 | +0.3 |
Or see this region's nucleotide sequence