Strain Fitness in Shewanella loihica PV-4 around Shew_1112

Experiment: Thallium(I) acetate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 10 mg/ml
1,280,568	+		Shew_1111	0.49	-0.1
1,280,577	+		Shew_1111	0.49	+1.1
1,280,609	+		Shew_1111	0.53	+0.3
1,280,642	-		Shew_1111	0.56	+0.5
1,281,128	-				+0.4
1,281,128	-				-0.6
1,281,128	-				-0.7
1,281,128	-				+0.8
1,281,722	-				-2.2
1,281,969	+		Shew_1112	0.18	+0.0
1,282,279	+		Shew_1112	0.29	-1.2
1,282,336	-		Shew_1112	0.32	+0.2
1,282,336	-		Shew_1112	0.32	-0.2
1,282,475	-		Shew_1112	0.37	+0.4
1,282,584	+		Shew_1112	0.41	+0.3
1,282,592	-		Shew_1112	0.41	+0.8
1,282,770	+		Shew_1112	0.48	+0.1
1,282,778	-		Shew_1112	0.48	-0.2
1,282,865	-		Shew_1112	0.52	-0.3
1,282,933	+		Shew_1112	0.54	-0.4
1,283,304	+		Shew_1112	0.69	+0.0
1,283,410	-		Shew_1112	0.73	+0.9
1,283,639	-		Shew_1112	0.81	+0.2
1,283,810	-		Shew_1112	0.88	-1.1
1,284,035	+				-0.1
1,284,035	+				+0.0
1,284,113	-				-2.0
1,284,333	-				-0.3
1,284,367	-				+0.8
1,284,571	-		Shew_1113	0.21	-2.2
1,285,072	+		Shew_1113	0.54	+1.4