Strain Fitness in Shewanella loihica PV-4 around Shew_1023
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,182,871 | - | Shew_1023 | 0.24 | +0.7 | |
| 1,183,044 | + | Shew_1023 | 0.60 | +1.3 | |
| 1,183,065 | - | Shew_1023 | 0.64 | +0.1 | |
| 1,183,233 | + | +0.4 | |||
| 1,183,373 | - | Shew_1024 | 0.22 | +0.2 | |
| 1,183,373 | - | Shew_1024 | 0.22 | +0.3 | |
| 1,183,588 | + | Shew_1024 | 0.57 | +0.3 | |
| 1,183,750 | + | Shew_1024 | 0.83 | +0.4 | |
| 1,183,925 | + | Shew_1025 | 0.18 | -0.2 | |
| 1,183,925 | + | Shew_1025 | 0.18 | -0.4 |
Or see this region's nucleotide sequence