Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0893 and Shew_0894 are separated by 191 nucleotides Shew_0894 and Shew_0895 are separated by 78 nucleotides Shew_0895 and Shew_0896 are separated by 10 nucleotides Shew_0896 and Shew_0897 overlap by 1 nucleotides
Shew_0893: Shew_0893 - hypothetical protein (RefSeq), at 1,014,521 to 1,015,060
_0893
Shew_0894: Shew_0894 - hypothetical protein (RefSeq), at 1,015,252 to 1,015,524
_0894
Shew_0895: Shew_0895 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 1,015,603 to 1,016,886
_0895
Shew_0896: Shew_0896 - two component transcriptional regulator (RefSeq), at 1,016,897 to 1,017,610
_0896
Shew_0897: Shew_0897 - hypothetical protein (RefSeq), at 1,017,610 to 1,018,011
_0897
Position (kb)
1015
1016
1017 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1014.805 kb on + strand, within Shew_0893 at 1014.858 kb on - strand, within Shew_0893 at 1014.911 kb on - strand, within Shew_0893 at 1015.053 kb on - strand at 1015.157 kb on + strand at 1015.733 kb on - strand, within Shew_0895 at 1015.833 kb on + strand, within Shew_0895 at 1016.083 kb on + strand, within Shew_0895 at 1016.093 kb on + strand, within Shew_0895 at 1016.197 kb on + strand, within Shew_0895 at 1016.327 kb on + strand, within Shew_0895 at 1016.335 kb on - strand, within Shew_0895 at 1016.428 kb on - strand, within Shew_0895 at 1016.693 kb on + strand, within Shew_0895 at 1016.855 kb on + strand at 1016.867 kb on - strand at 1016.867 kb on - strand at 1017.316 kb on + strand, within Shew_0896 at 1017.406 kb on + strand, within Shew_0896 at 1017.406 kb on + strand, within Shew_0896 at 1017.414 kb on - strand, within Shew_0896 at 1017.414 kb on - strand, within Shew_0896 at 1017.414 kb on - strand, within Shew_0896 at 1017.414 kb on - strand, within Shew_0896 at 1017.414 kb on - strand, within Shew_0896 at 1017.414 kb on - strand, within Shew_0896 at 1017.484 kb on - strand, within Shew_0896 at 1017.775 kb on + strand, within Shew_0897 at 1017.851 kb on - strand, within Shew_0897
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 1,014,805 + Shew_0893 0.53 +1.2 1,014,858 - Shew_0893 0.62 +0.4 1,014,911 - Shew_0893 0.72 -0.1 1,015,053 - +0.1 1,015,157 + +0.1 1,015,733 - Shew_0895 0.10 +0.8 1,015,833 + Shew_0895 0.18 +1.6 1,016,083 + Shew_0895 0.37 +1.1 1,016,093 + Shew_0895 0.38 +1.1 1,016,197 + Shew_0895 0.46 +1.7 1,016,327 + Shew_0895 0.56 +2.9 1,016,335 - Shew_0895 0.57 +1.3 1,016,428 - Shew_0895 0.64 +1.0 1,016,693 + Shew_0895 0.85 +2.0 1,016,855 + +0.9 1,016,867 - +0.9 1,016,867 - +0.8 1,017,316 + Shew_0896 0.59 -1.1 1,017,406 + Shew_0896 0.71 +0.5 1,017,406 + Shew_0896 0.71 +1.1 1,017,414 - Shew_0896 0.72 +1.0 1,017,414 - Shew_0896 0.72 +0.0 1,017,414 - Shew_0896 0.72 +0.1 1,017,414 - Shew_0896 0.72 +0.8 1,017,414 - Shew_0896 0.72 -0.5 1,017,414 - Shew_0896 0.72 +0.6 1,017,484 - Shew_0896 0.82 +0.2 1,017,775 + Shew_0897 0.41 +0.7 1,017,851 - Shew_0897 0.60 -0.2
Or see this region's nucleotide sequence