Strain Fitness in Shewanella loihica PV-4 around Shew_0799
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
910,910 | + | -0.2 | |||
911,039 | + | Shew_0798 | 0.12 | +0.3 | |
911,147 | + | Shew_0798 | 0.37 | +0.3 | |
911,155 | - | Shew_0798 | 0.38 | +0.1 | |
911,155 | - | Shew_0798 | 0.38 | +1.0 | |
911,252 | - | Shew_0798 | 0.61 | -0.4 | |
911,575 | - | +0.7 | |||
911,705 | - | -1.5 | |||
912,110 | + | Shew_0799 | 0.78 | -2.6 | |
912,211 | - | -0.9 | |||
912,330 | + | -0.4 | |||
912,406 | + | Shew_0800 | 0.13 | +0.5 | |
912,607 | + | Shew_0800 | 0.29 | +0.1 | |
912,607 | + | Shew_0800 | 0.29 | -0.0 | |
912,625 | - | Shew_0800 | 0.30 | -1.4 | |
912,750 | + | Shew_0800 | 0.40 | -0.2 | |
912,758 | - | Shew_0800 | 0.41 | +0.1 | |
912,803 | - | Shew_0800 | 0.45 | -0.1 | |
912,891 | - | Shew_0800 | 0.52 | -1.8 |
Or see this region's nucleotide sequence