Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0746 and Shew_0747 are separated by 206 nucleotides Shew_0747 and Shew_0748 are separated by 121 nucleotides Shew_0748 and Shew_0749 are separated by 71 nucleotides
Shew_0746: Shew_0746 - diguanylate cyclase (RefSeq), at 846,833 to 847,777
_0746
Shew_0747: Shew_0747 - GGDEF domain-containing protein (RefSeq), at 847,984 to 848,940
_0747
Shew_0748: Shew_0748 - acetyltransferase (RefSeq), at 849,062 to 849,622
_0748
Shew_0749: Shew_0749 - hypothetical protein (RefSeq), at 849,694 to 850,038
_0749
Position (kb) 847
848
849 Strain fitness (log2 ratio) -1
0
1
2 at 847.065 kb on - strand, within Shew_0746 at 847.553 kb on - strand, within Shew_0746 at 847.555 kb on + strand, within Shew_0746 at 847.618 kb on - strand, within Shew_0746 at 848.310 kb on + strand, within Shew_0747 at 848.465 kb on - strand, within Shew_0747 at 848.569 kb on + strand, within Shew_0747 at 848.577 kb on - strand, within Shew_0747 at 848.681 kb on + strand, within Shew_0747 at 848.731 kb on + strand, within Shew_0747 at 848.946 kb on + strand at 849.039 kb on + strand at 849.141 kb on + strand, within Shew_0748 at 849.330 kb on - strand, within Shew_0748 at 849.404 kb on - strand, within Shew_0748 at 849.417 kb on + strand, within Shew_0748 at 849.417 kb on + strand, within Shew_0748 at 849.543 kb on - strand, within Shew_0748 at 849.617 kb on + strand at 849.775 kb on - strand, within Shew_0749 at 849.838 kb on - strand, within Shew_0749
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 847,065 - Shew_0746 0.25 -0.4 847,553 - Shew_0746 0.76 -0.0 847,555 + Shew_0746 0.76 +1.0 847,618 - Shew_0746 0.83 +0.4 848,310 + Shew_0747 0.34 +0.4 848,465 - Shew_0747 0.50 -1.7 848,569 + Shew_0747 0.61 +0.3 848,577 - Shew_0747 0.62 +0.2 848,681 + Shew_0747 0.73 -1.3 848,731 + Shew_0747 0.78 -0.0 848,946 + +0.4 849,039 + +0.1 849,141 + Shew_0748 0.14 +0.5 849,330 - Shew_0748 0.48 +0.3 849,404 - Shew_0748 0.61 +0.6 849,417 + Shew_0748 0.63 -0.1 849,417 + Shew_0748 0.63 +2.2 849,543 - Shew_0748 0.86 -0.7 849,617 + +0.4 849,775 - Shew_0749 0.23 -0.2 849,838 - Shew_0749 0.42 +0.4
Or see this region's nucleotide sequence