Strain Fitness in Shewanella loihica PV-4 around Shew_0603
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 681,225 | + | +0.2 | |||
| 681,288 | + | -0.6 | |||
| 681,293 | + | +0.3 | |||
| 681,695 | - | Shew_0602 | 0.29 | +0.4 | |
| 681,793 | + | Shew_0602 | 0.44 | -0.4 | |
| 681,950 | - | Shew_0602 | 0.68 | +0.2 | |
| 681,999 | - | Shew_0602 | 0.76 | +0.1 | |
| 682,135 | - | +0.3 | |||
| 682,140 | - | -0.2 | |||
| 682,229 | + | Shew_0603 | 0.11 | +0.3 | |
| 682,309 | + | Shew_0603 | 0.30 | +0.9 | |
| 682,318 | + | Shew_0603 | 0.32 | +0.6 | |
| 682,813 | - | +0.5 | |||
| 682,938 | + | Shew_0604 | 0.11 | -0.5 | |
| 682,946 | - | Shew_0604 | 0.12 | -1.2 | |
| 682,990 | - | Shew_0604 | 0.14 | -0.5 | |
| 683,068 | + | Shew_0604 | 0.20 | +0.6 | |
| 683,107 | - | Shew_0604 | 0.22 | -0.3 |
Or see this region's nucleotide sequence