Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0466 and Shew_0467 are separated by 3 nucleotides Shew_0467 and Shew_0468 are separated by 196 nucleotides
Shew_0466: Shew_0466 - acriflavin resistance protein (RefSeq), at 521,519 to 524,593
_0466
Shew_0467: Shew_0467 - RND family efflux transporter MFP subunit (RefSeq), at 524,597 to 525,679
_0467
Shew_0468: Shew_0468 - LysR family transcriptional regulator (RefSeq), at 525,876 to 526,820
_0468
Position (kb) 524
525
526 Strain fitness (log2 ratio) -1
0
1
2
3 at 523.904 kb on - strand, within Shew_0466 at 524.015 kb on - strand, within Shew_0466 at 524.175 kb on - strand, within Shew_0466 at 524.401 kb on + strand at 524.448 kb on + strand at 524.630 kb on - strand at 524.685 kb on + strand at 524.750 kb on + strand, within Shew_0467 at 524.758 kb on - strand, within Shew_0467 at 524.994 kb on + strand, within Shew_0467 at 525.179 kb on - strand, within Shew_0467 at 525.214 kb on + strand, within Shew_0467 at 525.214 kb on + strand, within Shew_0467 at 525.233 kb on - strand, within Shew_0467 at 525.255 kb on - strand, within Shew_0467 at 525.579 kb on - strand at 525.897 kb on - strand at 525.907 kb on - strand at 526.044 kb on - strand, within Shew_0468 at 526.106 kb on + strand, within Shew_0468 at 526.192 kb on - strand, within Shew_0468 at 526.549 kb on + strand, within Shew_0468 at 526.557 kb on - strand, within Shew_0468
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 523,904 - Shew_0466 0.78 +0.9 524,015 - Shew_0466 0.81 +0.6 524,175 - Shew_0466 0.86 +0.7 524,401 + +0.2 524,448 + -0.3 524,630 - +0.6 524,685 + +1.5 524,750 + Shew_0467 0.14 +1.7 524,758 - Shew_0467 0.15 +0.4 524,994 + Shew_0467 0.37 +0.4 525,179 - Shew_0467 0.54 +1.6 525,214 + Shew_0467 0.57 +2.2 525,214 + Shew_0467 0.57 +3.0 525,233 - Shew_0467 0.59 +2.8 525,255 - Shew_0467 0.61 +1.7 525,579 - +1.9 525,897 - +2.6 525,907 - +2.2 526,044 - Shew_0468 0.18 +2.4 526,106 + Shew_0468 0.24 +1.9 526,192 - Shew_0468 0.33 +1.7 526,549 + Shew_0468 0.71 +2.7 526,557 - Shew_0468 0.72 +2.1
Or see this region's nucleotide sequence