Strain Fitness in Shewanella loihica PV-4 around Shew_0415
Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 10 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 468,303 | - | Shew_0414 | 0.24 | +0.4 | |
| 468,426 | + | Shew_0414 | 0.35 | +0.1 | |
| 468,427 | + | Shew_0414 | 0.35 | +0.4 | |
| 468,620 | - | Shew_0414 | 0.52 | +1.7 | |
| 468,721 | + | Shew_0414 | 0.61 | +1.9 | |
| 468,786 | - | Shew_0414 | 0.66 | +1.0 | |
| 468,852 | - | Shew_0414 | 0.72 | +1.3 | |
| 469,364 | - | Shew_0415 | 0.29 | -0.4 | |
| 469,515 | - | Shew_0415 | 0.56 | -0.8 | |
| 469,560 | - | Shew_0415 | 0.65 | +0.1 | |
| 469,715 | + | -0.6 | |||
| 469,724 | + | +0.2 | |||
| 469,732 | - | +0.3 | |||
| 470,142 | - | Shew_0416 | 0.18 | +0.9 | |
| 470,271 | - | Shew_0416 | 0.28 | +0.3 |
Or see this region's nucleotide sequence