Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0303 and Shew_0304 are separated by 222 nucleotides Shew_0304 and Shew_0305 are separated by 240 nucleotides Shew_0305 and Shew_0306 are separated by 29 nucleotides
Shew_0303: Shew_0303 - hypothetical protein (RefSeq), at 324,998 to 326,350
_0303
Shew_0304: Shew_0304 - hypothetical protein (RefSeq), at 326,573 to 326,833
_0304
Shew_0305: Shew_0305 - ATP-dependent DNA helicase Rep (RefSeq), at 327,074 to 329,086
_0305
Shew_0306: Shew_0306 - diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq), at 329,116 to 331,764
_0306
Position (kb) 327
328
329
330 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 326.104 kb on - strand, within Shew_0303 at 326.128 kb on - strand, within Shew_0303 at 326.128 kb on - strand, within Shew_0303 at 326.184 kb on + strand, within Shew_0303 at 326.265 kb on - strand at 326.403 kb on - strand at 326.518 kb on - strand at 326.649 kb on + strand, within Shew_0304 at 326.764 kb on + strand, within Shew_0304 at 326.772 kb on - strand, within Shew_0304 at 326.934 kb on - strand at 329.254 kb on - strand at 329.395 kb on + strand, within Shew_0306 at 329.395 kb on + strand, within Shew_0306 at 329.395 kb on + strand, within Shew_0306 at 329.395 kb on + strand, within Shew_0306 at 329.395 kb on + strand, within Shew_0306 at 329.403 kb on - strand, within Shew_0306 at 329.430 kb on + strand, within Shew_0306 at 329.430 kb on + strand, within Shew_0306 at 329.438 kb on - strand, within Shew_0306 at 329.438 kb on - strand, within Shew_0306 at 329.438 kb on - strand, within Shew_0306 at 329.438 kb on - strand, within Shew_0306 at 329.548 kb on - strand, within Shew_0306 at 329.625 kb on + strand, within Shew_0306 at 329.674 kb on - strand, within Shew_0306 at 329.674 kb on - strand, within Shew_0306 at 329.948 kb on + strand, within Shew_0306
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 326,104 - Shew_0303 0.82 -3.1 326,128 - Shew_0303 0.84 -0.9 326,128 - Shew_0303 0.84 +0.1 326,184 + Shew_0303 0.88 +0.2 326,265 - +0.7 326,403 - -1.0 326,518 - -0.1 326,649 + Shew_0304 0.29 -2.4 326,764 + Shew_0304 0.73 -4.1 326,772 - Shew_0304 0.76 -3.7 326,934 - +0.7 329,254 - +0.0 329,395 + Shew_0306 0.11 +0.6 329,395 + Shew_0306 0.11 +0.1 329,395 + Shew_0306 0.11 +0.7 329,395 + Shew_0306 0.11 +1.5 329,395 + Shew_0306 0.11 +0.8 329,403 - Shew_0306 0.11 +0.1 329,430 + Shew_0306 0.12 +0.1 329,430 + Shew_0306 0.12 +0.1 329,438 - Shew_0306 0.12 +1.0 329,438 - Shew_0306 0.12 +0.1 329,438 - Shew_0306 0.12 +1.1 329,438 - Shew_0306 0.12 -0.0 329,548 - Shew_0306 0.16 +0.1 329,625 + Shew_0306 0.19 -0.5 329,674 - Shew_0306 0.21 -0.4 329,674 - Shew_0306 0.21 +0.0 329,948 + Shew_0306 0.31 +0.6
Or see this region's nucleotide sequence