Strain Fitness in Shewanella loihica PV-4 around Shew_0128

Experiment: Thallium(I) acetate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 10 mg/ml
137,379	+		Shew_0126	0.71	+0.1
137,415	+		Shew_0126	0.78	+0.7
137,423	-		Shew_0126	0.80	+0.6
137,551	+				+1.8
137,691	+		Shew_0127	0.27	+1.6
137,699	-		Shew_0127	0.28	+1.3
137,822	+		Shew_0127	0.48	+1.4
137,833	+		Shew_0127	0.50	+2.9
137,947	-		Shew_0127	0.69	+3.2
138,203	-				-1.8
138,265	-				+0.6
138,266	+				-0.1
138,274	-				+1.1
138,276	+				+1.1
138,276	+				+1.6
138,276	+				+0.4
138,276	+				+1.3
138,276	+				-2.1
138,276	+				-0.0
138,276	+				+0.1
138,276	+				+1.4
138,276	+				-0.1
138,276	+				+0.5
138,284	-				-0.3
138,284	-				+0.2
138,284	-				+0.8
138,284	-				-0.6
138,284	-				+0.1
138,284	-				-1.0
138,284	-				-0.1
138,284	-				-0.1
138,284	-				+0.7
138,660	-		Shew_0128	0.59	-0.1
138,660	-		Shew_0128	0.59	+1.3
138,829	+		Shew_0128	0.84	+0.6
138,843	+		Shew_0128	0.87	+0.2
139,081	-				-0.0
139,161	-	nudE	Shew_0129	0.24	-0.2
139,239	+	nudE	Shew_0129	0.38	+0.3
139,310	-	nudE	Shew_0129	0.51	-0.4
139,326	+	nudE	Shew_0129	0.54	-0.4
139,367	-	nudE	Shew_0129	0.62	+0.1
139,488	+	nudE	Shew_0129	0.84	-0.2
139,642	-				+0.2
139,917	-		Shew_0130	0.35	+1.2