Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0046 and Shew_0047 are separated by 10 nucleotides Shew_0047 and Shew_0048 are separated by 118 nucleotides Shew_0048 and Shew_0049 are separated by 380 nucleotides
Shew_0046: Shew_0046 - molybdenum cofactor synthesis domain-containing protein (RefSeq), at 56,169 to 57,416
_0046
Shew_0047: Shew_0047 - molybdopterin biosynthesis protein MoeB (RefSeq), at 57,427 to 58,194
_0047
Shew_0048: Shew_0048 - short chain dehydrogenase (RefSeq), at 58,313 to 59,020
_0048
Shew_0049: Shew_0049 - choline/carnitine/betaine transporter (RefSeq), at 59,401 to 60,972
_0049
Position (kb) 58
59
60 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 57.361 kb on - strand at 57.390 kb on - strand at 57.400 kb on - strand at 57.500 kb on + strand at 57.525 kb on - strand, within Shew_0047 at 57.565 kb on + strand, within Shew_0047 at 57.696 kb on + strand, within Shew_0047 at 57.704 kb on - strand, within Shew_0047 at 57.704 kb on - strand, within Shew_0047 at 57.752 kb on - strand, within Shew_0047 at 58.002 kb on - strand, within Shew_0047 at 58.399 kb on - strand, within Shew_0048 at 58.445 kb on - strand, within Shew_0048 at 58.649 kb on - strand, within Shew_0048 at 58.759 kb on + strand, within Shew_0048 at 58.834 kb on - strand, within Shew_0048 at 58.897 kb on + strand, within Shew_0048 at 58.902 kb on + strand, within Shew_0048 at 58.969 kb on + strand at 59.003 kb on - strand at 59.464 kb on + strand at 59.565 kb on + strand, within Shew_0049 at 59.781 kb on - strand, within Shew_0049 at 59.903 kb on - strand, within Shew_0049 at 59.918 kb on - strand, within Shew_0049 at 59.918 kb on - strand, within Shew_0049
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 57,361 - +1.4 57,390 - +0.5 57,400 - -0.1 57,500 + +0.0 57,525 - Shew_0047 0.13 +0.2 57,565 + Shew_0047 0.18 +0.3 57,696 + Shew_0047 0.35 -2.8 57,704 - Shew_0047 0.36 -1.4 57,704 - Shew_0047 0.36 +0.1 57,752 - Shew_0047 0.42 -0.8 58,002 - Shew_0047 0.75 +0.3 58,399 - Shew_0048 0.12 -1.1 58,445 - Shew_0048 0.19 -0.1 58,649 - Shew_0048 0.47 -0.9 58,759 + Shew_0048 0.63 -0.3 58,834 - Shew_0048 0.74 -0.5 58,897 + Shew_0048 0.82 -0.3 58,902 + Shew_0048 0.83 -2.3 58,969 + +0.5 59,003 - +0.8 59,464 + -0.2 59,565 + Shew_0049 0.10 -0.0 59,781 - Shew_0049 0.24 +0.5 59,903 - Shew_0049 0.32 -0.1 59,918 - Shew_0049 0.33 -0.0 59,918 - Shew_0049 0.33 +0.0
Or see this region's nucleotide sequence