Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2282

Experiment: Flask grown to static phase (untill yellowing)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask grown to static phase (untill yellowing)
2,350,141	+				-1.0
2,350,143	+				-1.6
2,350,151	-				-2.8
2,350,151	-				-3.3
2,350,153	+				+1.0
2,350,201	+				-0.4
2,350,209	-				+0.9
2,350,212	+				-0.4
2,350,234	+				-0.0
2,350,252	-				+1.1
2,350,273	+				-1.0
2,350,279	+				+1.6
2,350,279	+				+1.2
2,350,286	+				-1.5
2,350,321	+		Synpcc7942_2281	0.13	-0.5
2,350,334	-		Synpcc7942_2281	0.14	-0.9
2,350,354	+		Synpcc7942_2281	0.16	-2.6
2,350,372	+		Synpcc7942_2281	0.18	-3.3
2,350,372	+		Synpcc7942_2281	0.18	-1.6
2,350,380	-		Synpcc7942_2281	0.19	-0.4
2,350,380	-		Synpcc7942_2281	0.19	-1.5
2,350,380	-		Synpcc7942_2281	0.19	-1.4
2,350,472	+		Synpcc7942_2281	0.29	-2.0
2,350,474	-		Synpcc7942_2281	0.29	-1.2
2,350,475	-		Synpcc7942_2281	0.29	-2.7
2,350,482	+		Synpcc7942_2281	0.30	-0.9
2,350,492	+		Synpcc7942_2281	0.31	-0.9
2,350,500	-		Synpcc7942_2281	0.32	-1.9
2,350,528	+		Synpcc7942_2281	0.34	-0.6
2,350,536	+				-1.6
2,350,544	-		Synpcc7942_2281	0.36	-4.2
2,350,544	-		Synpcc7942_2281	0.36	-2.9
2,350,546	+		Synpcc7942_2281	0.36	-3.7
2,350,546	+		Synpcc7942_2281	0.36	-3.2
2,350,573	+		Synpcc7942_2281	0.39	-1.9
2,350,606	-		Synpcc7942_2281	0.43	-1.9
2,350,618	-		Synpcc7942_2281	0.44	-0.4
2,350,739	+		Synpcc7942_2281	0.57	-1.2
2,350,759	-		Synpcc7942_2281	0.59	-1.4
2,350,764	+		Synpcc7942_2281	0.59	-1.2
2,350,820	+		Synpcc7942_2281	0.65	-2.6
2,350,832	+		Synpcc7942_2281	0.66	-1.6
2,350,880	-		Synpcc7942_2281	0.71	-1.2
2,350,928	+		Synpcc7942_2281	0.76	-0.8
2,350,960	+		Synpcc7942_2281	0.80	-0.9
2,350,960	+		Synpcc7942_2281	0.80	-0.4
2,351,001	+		Synpcc7942_2281	0.84	-1.0
2,351,022	+		Synpcc7942_2281	0.86	-1.2
2,351,027	+		Synpcc7942_2281	0.87	-4.6
2,351,027	+		Synpcc7942_2281	0.87	-1.4
2,351,035	-		Synpcc7942_2281	0.87	-1.0
2,351,100	+				-3.0
2,351,108	-				-1.5
2,351,108	-				-1.0
2,351,108	-				-1.7
2,351,182	+				+1.9
2,351,190	-				+1.0
2,351,191	-				-0.6
2,351,193	+				-0.0
2,351,193	+				-0.9
2,351,193	+				-2.7
2,351,193	+				-1.3
2,351,201	-				-0.7
2,351,201	-				+0.4
2,351,201	-				-3.1
2,351,204	-				-2.4
2,351,243	+				-1.5
2,351,243	+				-1.4
2,351,243	+				+1.1
2,351,251	-				-2.9
2,351,251	-				-0.4
2,351,308	-		Synpcc7942_2282	0.11	+4.1
2,351,367	+		Synpcc7942_2282	0.14	-1.0
2,351,430	+		Synpcc7942_2282	0.17	+0.4
2,351,435	+		Synpcc7942_2282	0.17	-2.9
2,351,443	+		Synpcc7942_2282	0.18	-2.4
2,351,443	+		Synpcc7942_2282	0.18	-0.4
2,351,506	+		Synpcc7942_2282	0.21	-0.5
2,351,517	+		Synpcc7942_2282	0.22	-1.7
2,351,517	+		Synpcc7942_2282	0.22	-2.7
2,351,547	-		Synpcc7942_2282	0.23	-1.5
2,351,656	+		Synpcc7942_2282	0.29	-2.3
2,351,696	+		Synpcc7942_2282	0.31	-2.5
2,351,721	-		Synpcc7942_2282	0.32	-3.2
2,351,766	+		Synpcc7942_2282	0.35	-0.7
2,351,766	+		Synpcc7942_2282	0.35	-1.6
2,351,766	+		Synpcc7942_2282	0.35	-1.2
2,351,766	+		Synpcc7942_2282	0.35	-1.7
2,351,766	+		Synpcc7942_2282	0.35	-1.0
2,351,766	+		Synpcc7942_2282	0.35	-2.2
2,351,774	-		Synpcc7942_2282	0.35	-2.0
2,351,774	-		Synpcc7942_2282	0.35	-1.2
2,351,778	-		Synpcc7942_2282	0.35	-1.4
2,351,814	+		Synpcc7942_2282	0.37	-0.2
2,351,842	+		Synpcc7942_2282	0.39	-0.9
2,351,850	+		Synpcc7942_2282	0.39	-2.6
2,351,850	+		Synpcc7942_2282	0.39	+0.6
2,351,856	+		Synpcc7942_2282	0.39	-1.6
2,351,874	-		Synpcc7942_2282	0.40	-1.8
2,351,876	+		Synpcc7942_2282	0.40	-1.6
2,351,919	+		Synpcc7942_2282	0.43	-2.7
2,351,927	-		Synpcc7942_2282	0.43	-2.1
2,351,940	+		Synpcc7942_2282	0.44	-2.7
2,351,956	-		Synpcc7942_2282	0.45	-1.3
2,351,956	-		Synpcc7942_2282	0.45	-1.1
2,351,961	-		Synpcc7942_2282	0.45	+0.4
2,351,963	+		Synpcc7942_2282	0.45	+3.0
2,351,968	+		Synpcc7942_2282	0.45	-0.0
2,351,988	+		Synpcc7942_2282	0.46	-3.0
2,352,011	+		Synpcc7942_2282	0.47	+0.4
2,352,036	+		Synpcc7942_2282	0.49	+1.2
2,352,038	-		Synpcc7942_2282	0.49	-0.7
2,352,076	-		Synpcc7942_2282	0.51	-3.0
2,352,102	+		Synpcc7942_2282	0.52	+0.2
2,352,111	+		Synpcc7942_2282	0.53	-0.6
2,352,112	-		Synpcc7942_2282	0.53	-3.2
2,352,119	+		Synpcc7942_2282	0.53	-3.3
2,352,129	+		Synpcc7942_2282	0.54	-2.7
2,352,129	+		Synpcc7942_2282	0.54	-1.9
2,352,137	-		Synpcc7942_2282	0.54	-1.6
2,352,137	-		Synpcc7942_2282	0.54	-0.4
2,352,189	-		Synpcc7942_2282	0.57	-1.7
2,352,201	-		Synpcc7942_2282	0.57	-0.5
2,352,288	-		Synpcc7942_2282	0.62	-1.5
2,352,306	+		Synpcc7942_2282	0.63	-0.9
2,352,309	+		Synpcc7942_2282	0.63	-3.5
2,352,309	+		Synpcc7942_2282	0.63	-0.4
2,352,312	-		Synpcc7942_2282	0.63	-0.7
2,352,320	-		Synpcc7942_2282	0.64	-1.5
2,352,345	+		Synpcc7942_2282	0.65	-1.0
2,352,366	+		Synpcc7942_2282	0.66	-2.7
2,352,366	+		Synpcc7942_2282	0.66	-2.1
2,352,366	+		Synpcc7942_2282	0.66	-3.4
2,352,366	+		Synpcc7942_2282	0.66	-1.4
2,352,374	-		Synpcc7942_2282	0.66	-1.0
2,352,374	-		Synpcc7942_2282	0.66	-0.9
2,352,374	-		Synpcc7942_2282	0.66	-1.9
2,352,374	-		Synpcc7942_2282	0.66	-2.6
2,352,383	-		Synpcc7942_2282	0.67	-1.9
2,352,383	-		Synpcc7942_2282	0.67	-2.1
2,352,394	+		Synpcc7942_2282	0.68	-1.0
2,352,398	-		Synpcc7942_2282	0.68	-2.7
2,352,401	+		Synpcc7942_2282	0.68	-1.5
2,352,407	-		Synpcc7942_2282	0.68	-1.5
2,352,483	+		Synpcc7942_2282	0.72	-1.7
2,352,483	+		Synpcc7942_2282	0.72	+0.2
2,352,491	-		Synpcc7942_2282	0.73	-1.0
2,352,506	+		Synpcc7942_2282	0.73	-1.0
2,352,544	-		Synpcc7942_2282	0.75	-1.6
2,352,584	+		Synpcc7942_2282	0.77	-0.4
2,352,594	+		Synpcc7942_2282	0.78	-4.0
2,352,594	-		Synpcc7942_2282	0.78	-0.2
2,352,596	+		Synpcc7942_2282	0.78	-0.6
2,352,604	-		Synpcc7942_2282	0.78	+0.6
2,352,607	+		Synpcc7942_2282	0.79	+1.7
2,352,607	+		Synpcc7942_2282	0.79	-3.0
2,352,610	+		Synpcc7942_2282	0.79	-0.3
2,352,615	-		Synpcc7942_2282	0.79	-1.9
2,352,643	+		Synpcc7942_2282	0.81	-1.2
2,352,652	-		Synpcc7942_2282	0.81	-0.6
2,352,680	-		Synpcc7942_2282	0.82	-0.4
2,352,715	-		Synpcc7942_2282	0.84	-1.7
2,352,737	-		Synpcc7942_2282	0.85	-2.6
2,352,766	-		Synpcc7942_2282	0.87	-2.7
2,352,778	+		Synpcc7942_2282	0.88	-1.2
2,352,779	-		Synpcc7942_2282	0.88	+0.8
2,352,805	-		Synpcc7942_2282	0.89	-3.2
2,352,836	+				+0.8
2,352,874	+				-0.0
2,352,895	+				-2.4
2,352,896	+				+0.4
2,352,903	-				-2.0
2,352,911	-				-4.0
2,352,916	-				-1.0
2,352,935	-				-2.4
2,352,940	-				-0.1
2,353,002	-				-0.4
2,353,022	+				-2.1
2,353,060	+				+1.8
2,353,060	+				+0.3
2,353,062	-				+0.7
2,353,068	-				+1.7
2,353,068	-				+2.5
2,353,076	+				+0.8
2,353,076	+				+1.5
2,353,076	+				-0.6
2,353,123	+				-0.4
2,353,132	+				-2.3
2,353,132	+				-3.6
2,353,132	+				-1.4
2,353,140	-				+0.4
2,353,140	-				+1.7
2,353,155	-				-3.0
2,353,164	-				-1.9
2,353,164	-				-1.1
2,353,189	-				-0.6
2,353,189	-		Synpcc7942_2283	0.10	-1.7
2,353,210	+		Synpcc7942_2283	0.13	+0.4
2,353,235	+		Synpcc7942_2283	0.17	-0.4
2,353,237	-		Synpcc7942_2283	0.17	+2.5
2,353,243	-		Synpcc7942_2283	0.18	-3.9
2,353,243	-		Synpcc7942_2283	0.18	+0.4
2,353,249	-		Synpcc7942_2283	0.19	+2.2
2,353,269	-		Synpcc7942_2283	0.21	+1.2
2,353,280	-				+0.2
2,353,287	+		Synpcc7942_2283	0.24	+1.1
2,353,287	+		Synpcc7942_2283	0.24	-1.9
2,353,290	-		Synpcc7942_2283	0.24	-1.9
2,353,295	-		Synpcc7942_2283	0.25	-2.7
2,353,295	-		Synpcc7942_2283	0.25	-0.3
2,353,295	-		Synpcc7942_2283	0.25	-1.4
2,353,306	+		Synpcc7942_2283	0.26	+1.5
2,353,314	-		Synpcc7942_2283	0.27	-1.6
2,353,324	-		Synpcc7942_2283	0.29	-0.2
2,353,342	+		Synpcc7942_2283	0.31	-1.0
2,353,344	-		Synpcc7942_2283	0.31	+1.5
2,353,350	-		Synpcc7942_2283	0.32	-2.7
2,353,392	+		Synpcc7942_2283	0.38	-1.6
2,353,428	-		Synpcc7942_2283	0.43	+2.1
2,353,428	-		Synpcc7942_2283	0.43	+0.5
2,353,428	-		Synpcc7942_2283	0.43	-1.1
2,353,428	-		Synpcc7942_2283	0.43	-2.0
2,353,428	-		Synpcc7942_2283	0.43	-1.2
2,353,428	-		Synpcc7942_2283	0.43	+1.0
2,353,438	-		Synpcc7942_2283	0.44	+2.7
2,353,440	-		Synpcc7942_2283	0.44	-2.9
2,353,440	-		Synpcc7942_2283	0.44	-3.7
2,353,475	+		Synpcc7942_2283	0.49	-1.0
2,353,479	-		Synpcc7942_2283	0.49	-1.4
2,353,500	-		Synpcc7942_2283	0.52	+1.4
2,353,504	+		Synpcc7942_2283	0.53	-3.0
2,353,512	-		Synpcc7942_2283	0.54	-2.0
2,353,602	-		Synpcc7942_2283	0.66	+0.4
2,353,619	+		Synpcc7942_2283	0.68	-0.5
2,353,619	+		Synpcc7942_2283	0.68	+0.4
2,353,627	-		Synpcc7942_2283	0.69	-2.9
2,353,627	-		Synpcc7942_2283	0.69	-1.7
2,353,627	-		Synpcc7942_2283	0.69	-2.4
2,353,634	+		Synpcc7942_2283	0.70	+0.7
2,353,651	+		Synpcc7942_2283	0.73	+1.5
2,353,755	-		Synpcc7942_2283	0.87	-1.4
2,353,865	+				-0.3
2,353,912	+				+1.3
2,353,915	-				-0.6
2,353,917	+				+0.4
2,353,932	-				+0.8
2,353,932	-				-0.1
2,353,957	-	todF	Synpcc7942_2284	0.11	-1.2
2,353,957	-	todF	Synpcc7942_2284	0.11	+1.5
2,353,958	+	todF	Synpcc7942_2284	0.11	-2.1
2,353,966	-	todF	Synpcc7942_2284	0.12	-1.2
2,353,966	-	todF	Synpcc7942_2284	0.12	+0.3
2,353,975	-	todF	Synpcc7942_2284	0.12	-0.8
2,353,989	-	todF	Synpcc7942_2284	0.14	-1.6
2,354,011	+	todF	Synpcc7942_2284	0.16	-2.1