Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2052

Experiment: Flask grown to static phase (untill yellowing)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask grown to static phase (untill yellowing)
2,128,325	+		Synpcc7942_2051	0.32	+2.0
2,128,325	+		Synpcc7942_2051	0.32	+1.3
2,128,337	-		Synpcc7942_2051	0.33	-1.6
2,128,345	-		Synpcc7942_2051	0.34	+0.1
2,128,391	+		Synpcc7942_2051	0.37	-0.5
2,128,399	+		Synpcc7942_2051	0.37	-0.3
2,128,405	-		Synpcc7942_2051	0.38	+0.7
2,128,481	-		Synpcc7942_2051	0.43	-0.8
2,128,481	-		Synpcc7942_2051	0.43	-0.4
2,128,491	-		Synpcc7942_2051	0.44	+2.4
2,128,491	-		Synpcc7942_2051	0.44	-0.5
2,128,519	-		Synpcc7942_2051	0.46	-0.0
2,128,532	+		Synpcc7942_2051	0.47	-2.1
2,128,540	-		Synpcc7942_2051	0.47	-0.7
2,128,551	-		Synpcc7942_2051	0.48	+1.6
2,128,587	+		Synpcc7942_2051	0.50	-3.3
2,128,595	-		Synpcc7942_2051	0.51	+0.8
2,128,610	+		Synpcc7942_2051	0.52	+3.7
2,128,618	-		Synpcc7942_2051	0.52	+1.6
2,128,618	-		Synpcc7942_2051	0.52	+1.6
2,128,643	+		Synpcc7942_2051	0.54	+0.1
2,128,651	-		Synpcc7942_2051	0.55	-0.6
2,128,651	-		Synpcc7942_2051	0.55	+2.4
2,128,651	-		Synpcc7942_2051	0.55	-2.8
2,128,651	-		Synpcc7942_2051	0.55	+1.2
2,128,651	-		Synpcc7942_2051	0.55	+1.9
2,128,662	+		Synpcc7942_2051	0.56	+0.9
2,128,670	+		Synpcc7942_2051	0.56	+1.7
2,128,753	-		Synpcc7942_2051	0.62	-1.6
2,128,793	-		Synpcc7942_2051	0.65	-1.0
2,128,817	+				+0.0
2,128,824	+		Synpcc7942_2051	0.67	-1.5
2,128,830	+		Synpcc7942_2051	0.67	+4.8
2,128,838	-		Synpcc7942_2051	0.68	-1.3
2,128,846	+		Synpcc7942_2051	0.68	+1.3
2,128,858	+		Synpcc7942_2051	0.69	-3.1
2,128,866	-		Synpcc7942_2051	0.70	-0.9
2,128,866	-		Synpcc7942_2051	0.70	+2.4
2,128,876	-		Synpcc7942_2051	0.70	-1.5
2,128,889	-		Synpcc7942_2051	0.71	+1.7
2,128,896	+		Synpcc7942_2051	0.72	+2.5
2,128,904	-		Synpcc7942_2051	0.72	-2.3
2,128,904	-		Synpcc7942_2051	0.72	+0.5
2,129,000	+		Synpcc7942_2051	0.79	-2.1
2,129,013	-		Synpcc7942_2051	0.80	+1.3
2,129,032	+		Synpcc7942_2051	0.81	-1.0
2,129,050	-		Synpcc7942_2051	0.82	+0.2
2,129,055	-		Synpcc7942_2051	0.83	-1.6
2,129,055	-		Synpcc7942_2051	0.83	+0.3
2,129,071	-		Synpcc7942_2051	0.84	-1.6
2,129,080	+		Synpcc7942_2051	0.84	+1.3
2,129,131	-		Synpcc7942_2051	0.88	-0.3
2,129,156	+		Synpcc7942_2051	0.90	-0.8
2,129,156	+		Synpcc7942_2051	0.90	+2.4
2,129,198	+				+1.9
2,129,203	+				-2.1
2,129,203	+				+0.1
2,129,203	+				-3.1
2,129,203	+				-1.8
2,129,206	-				+0.9
2,129,206	-				+0.9
2,129,212	+				+2.2
2,129,246	+				+2.2
2,129,263	+				+1.5
2,129,268	-				-3.0
2,129,277	+				+0.7
2,129,285	-				+1.5
2,129,300	-				+1.4
2,129,306	-				+1.5
2,129,308	-				-0.6
2,129,308	-				+0.6
2,129,312	+				+0.7
2,129,313	-				+1.3
2,129,314	-				-0.1
2,129,344	-				+0.2
2,129,344	-				-1.3
2,129,349	-				-2.2
2,129,357	+				-3.7
2,129,372	+				-2.5
2,129,392	-				-1.8
2,129,403	-		Synpcc7942_2052	0.10	-2.1
2,129,423	+		Synpcc7942_2052	0.12	-3.7
2,129,431	-		Synpcc7942_2052	0.13	-2.8
2,129,448	+		Synpcc7942_2052	0.15	-3.0
2,129,482	+		Synpcc7942_2052	0.19	-2.0
2,129,482	+		Synpcc7942_2052	0.19	-1.9
2,129,488	+		Synpcc7942_2052	0.20	-3.1
2,129,489	+		Synpcc7942_2052	0.20	-2.4
2,129,512	+		Synpcc7942_2052	0.23	-1.7
2,129,548	+		Synpcc7942_2052	0.27	-1.7
2,129,607	+		Synpcc7942_2052	0.34	-1.4
2,129,638	+		Synpcc7942_2052	0.37	-1.3
2,129,642	-		Synpcc7942_2052	0.38	-2.6
2,129,664	+		Synpcc7942_2052	0.40	-4.0
2,129,689	-		Synpcc7942_2052	0.43	-1.2
2,129,762	+		Synpcc7942_2052	0.51	-2.6
2,129,785	-		Synpcc7942_2052	0.54	-1.8
2,129,862	+		Synpcc7942_2052	0.63	-4.0
2,129,865	-		Synpcc7942_2052	0.63	+0.4
2,129,870	+		Synpcc7942_2052	0.64	-2.0
2,129,904	-		Synpcc7942_2052	0.68	-3.1
2,129,905	+		Synpcc7942_2052	0.68	-3.9
2,129,949	+		Synpcc7942_2052	0.73	-2.1
2,129,950	+		Synpcc7942_2052	0.73	-0.6
2,129,951	+		Synpcc7942_2052	0.73	-2.2
2,129,951	+		Synpcc7942_2052	0.73	-1.6
2,129,957	-				-1.9
2,130,008	+		Synpcc7942_2052	0.79	-2.6
2,130,044	+		Synpcc7942_2052	0.84	-1.0
2,130,051	+		Synpcc7942_2052	0.84	-0.8
2,130,051	-		Synpcc7942_2052	0.84	-2.3
2,130,081	+		Synpcc7942_2052	0.88	-3.0
2,130,096	-		Synpcc7942_2052	0.90	+1.5
2,130,166	+				+0.0
2,130,166	+				+0.2
2,130,166	+				-2.6
2,130,184	+				+0.6
2,130,217	-				+0.2
2,130,248	+				+2.8
2,130,271	+				+1.4
2,130,278	+				-1.2
2,130,280	-				+1.4
2,130,290	+				+0.4
2,130,338	-				+2.2
2,130,340	+				+2.4
2,130,340	+				-1.0
2,130,376	-				-1.0
2,130,382	+				+0.4
2,130,382	+				+1.9
2,130,382	+				+2.8
2,130,390	-				+0.8
2,130,390	-				+1.7
2,130,390	-				-0.7
2,130,390	-				+1.0
2,130,390	-				-0.7
2,130,390	-				-1.9
2,130,392	+				+1.1
2,130,392	+				-1.0
2,130,392	+				-0.6
2,130,392	+				-1.1
2,130,394	+				+0.8
2,130,397	+				-1.7
2,130,400	-				+1.2
2,130,400	-				+2.1
2,130,400	-				-1.7
2,130,400	-				-2.9
2,130,400	-				-0.1
2,130,407	+				+0.9
2,130,407	+				-0.3
2,130,409	+				-1.2
2,130,415	-				-1.8
2,130,425	-				+1.2
2,130,437	+				+0.7
2,130,437	+				-0.5
2,130,452	-				+3.8
2,130,457	+				+0.5
2,130,465	-				+0.3
2,130,496	+				-0.3
2,130,499	-				-1.7
2,130,515	+				+0.9
2,130,558	-		Synpcc7942_2053	0.12	+3.0
2,130,575	-		Synpcc7942_2053	0.13	+2.0
2,130,603	+		Synpcc7942_2053	0.14	+3.5
2,130,625	-		Synpcc7942_2053	0.15	+2.7
2,130,662	-		Synpcc7942_2053	0.17	+1.4
2,130,733	+		Synpcc7942_2053	0.21	+0.8
2,130,787	+		Synpcc7942_2053	0.24	-0.1
2,130,828	+		Synpcc7942_2053	0.26	-0.0
2,130,828	+		Synpcc7942_2053	0.26	-1.1
2,130,828	+		Synpcc7942_2053	0.26	-1.2
2,130,828	+		Synpcc7942_2053	0.26	-0.8
2,130,834	-		Synpcc7942_2053	0.26	+1.7
2,130,836	-		Synpcc7942_2053	0.26	-0.6
2,130,836	-		Synpcc7942_2053	0.26	-1.1
2,130,836	-		Synpcc7942_2053	0.26	+1.8
2,130,836	-		Synpcc7942_2053	0.26	+2.4
2,130,846	+		Synpcc7942_2053	0.27	+0.1
2,130,854	-		Synpcc7942_2053	0.27	+2.0
2,130,870	+		Synpcc7942_2053	0.28	+3.0
2,130,873	-		Synpcc7942_2053	0.28	+0.2
2,130,900	+		Synpcc7942_2053	0.30	-1.5
2,130,925	-		Synpcc7942_2053	0.31	+0.9
2,130,933	+		Synpcc7942_2053	0.31	+1.5
2,130,933	-		Synpcc7942_2053	0.31	-0.5
2,130,948	+		Synpcc7942_2053	0.32	-1.3
2,131,044	+		Synpcc7942_2053	0.37	-1.1
2,131,063	-		Synpcc7942_2053	0.38	-2.3
2,131,078	+		Synpcc7942_2053	0.39	-2.8
2,131,078	-		Synpcc7942_2053	0.39	-1.1
2,131,123	-		Synpcc7942_2053	0.41	-2.6
2,131,133	-		Synpcc7942_2053	0.42	-0.1
2,131,151	+		Synpcc7942_2053	0.43	-0.3
2,131,151	+		Synpcc7942_2053	0.43	-1.1
2,131,159	-		Synpcc7942_2053	0.43	-0.2
2,131,159	-		Synpcc7942_2053	0.43	-1.8