Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1305

Experiment: Flask grown to static phase (untill yellowing)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask grown to static phase (untill yellowing)
1,330,836	-		Synpcc7942_1303	0.21	+0.4
1,330,842	+		Synpcc7942_1303	0.23	-0.7
1,330,860	-		Synpcc7942_1303	0.27	-1.6
1,330,872	-		Synpcc7942_1303	0.30	-0.9
1,330,878	-				-1.4
1,330,878	-		Synpcc7942_1303	0.32	-4.8
1,330,950	-		Synpcc7942_1303	0.50	-1.6
1,330,996	-		Synpcc7942_1303	0.61	-1.5
1,331,065	+		Synpcc7942_1303	0.78	-0.5
1,331,065	+		Synpcc7942_1303	0.78	+1.4
1,331,075	+		Synpcc7942_1303	0.81	-3.2
1,331,097	+		Synpcc7942_1303	0.86	-0.7
1,331,105	-		Synpcc7942_1303	0.88	-2.5
1,331,135	-				-1.1
1,331,152	+				-0.8
1,331,160	-				-1.8
1,331,166	+				+0.9
1,331,226	+		Synpcc7942_1304	0.12	+1.3
1,331,234	-		Synpcc7942_1304	0.13	-0.3
1,331,234	-		Synpcc7942_1304	0.13	-1.9
1,331,234	-		Synpcc7942_1304	0.13	+0.9
1,331,234	-		Synpcc7942_1304	0.13	+0.4
1,331,234	-		Synpcc7942_1304	0.13	+0.0
1,331,234	-		Synpcc7942_1304	0.13	+0.5
1,331,240	+		Synpcc7942_1304	0.14	+0.4
1,331,269	-		Synpcc7942_1304	0.19	+1.6
1,331,280	+		Synpcc7942_1304	0.21	-1.5
1,331,324	+		Synpcc7942_1304	0.29	+0.8
1,331,324	+		Synpcc7942_1304	0.29	+1.2
1,331,332	-		Synpcc7942_1304	0.30	+3.1
1,331,342	-		Synpcc7942_1304	0.32	-1.9
1,331,358	-		Synpcc7942_1304	0.35	+0.6
1,331,389	-		Synpcc7942_1304	0.40	-1.8
1,331,595	-				-1.4
1,331,621	+		Synpcc7942_1304	0.80	+1.1
1,331,621	+		Synpcc7942_1304	0.80	+2.1
1,331,626	+		Synpcc7942_1304	0.81	+1.7
1,331,629	-		Synpcc7942_1304	0.82	+2.4
1,331,629	-		Synpcc7942_1304	0.82	-1.8
1,331,685	+				-0.0
1,331,707	+				+0.3
1,331,715	-				+1.2
1,331,734	+				+1.3
1,331,758	+				+0.7
1,331,766	-				+1.4
1,331,774	+				+0.8
1,331,786	-				-1.0
1,331,796	-				-1.4
1,331,820	-				-1.2
1,331,901	+				-1.7
1,331,906	+				-2.8
1,331,906	+				+4.0
1,331,914	-				+1.6
1,331,922	-				-1.4
1,331,945	+				-3.4
1,331,982	+				-3.8
1,331,983	+				-2.1
1,331,989	+				-3.2
1,331,990	-				+1.3
1,331,997	-		Synpcc7942_1305	0.10	-1.4
1,331,997	-		Synpcc7942_1305	0.10	-0.9
1,332,015	+		Synpcc7942_1305	0.11	-1.2
1,332,028	+		Synpcc7942_1305	0.12	-0.7
1,332,059	+		Synpcc7942_1305	0.14	-1.1
1,332,059	+		Synpcc7942_1305	0.14	-2.4
1,332,059	+		Synpcc7942_1305	0.14	-1.9
1,332,067	-		Synpcc7942_1305	0.14	-3.2
1,332,072	-		Synpcc7942_1305	0.15	-2.6
1,332,076	+		Synpcc7942_1305	0.15	-2.0
1,332,086	+		Synpcc7942_1305	0.16	-3.5
1,332,099	-		Synpcc7942_1305	0.16	-1.5
1,332,116	-		Synpcc7942_1305	0.18	-2.8
1,332,116	-		Synpcc7942_1305	0.18	-1.5
1,332,117	+		Synpcc7942_1305	0.18	-2.3
1,332,117	-		Synpcc7942_1305	0.18	-2.1
1,332,127	-		Synpcc7942_1305	0.18	-3.2
1,332,149	+		Synpcc7942_1305	0.20	-2.3
1,332,157	+		Synpcc7942_1305	0.20	-0.7
1,332,189	+		Synpcc7942_1305	0.22	-3.2
1,332,197	-		Synpcc7942_1305	0.23	-3.4
1,332,197	-		Synpcc7942_1305	0.23	-1.9
1,332,210	+		Synpcc7942_1305	0.23	-2.5
1,332,366	-		Synpcc7942_1305	0.33	-1.4
1,332,373	+		Synpcc7942_1305	0.33	-0.6
1,332,419	-		Synpcc7942_1305	0.36	-4.4
1,332,423	+		Synpcc7942_1305	0.37	-1.6
1,332,467	-		Synpcc7942_1305	0.39	-2.7
1,332,467	-		Synpcc7942_1305	0.39	-1.8
1,332,502	+		Synpcc7942_1305	0.41	-4.6
1,332,502	+		Synpcc7942_1305	0.41	-1.6
1,332,519	+		Synpcc7942_1305	0.43	-0.5
1,332,526	+		Synpcc7942_1305	0.43	-2.1
1,332,526	+		Synpcc7942_1305	0.43	-2.8
1,332,526	+		Synpcc7942_1305	0.43	-1.8
1,332,533	+		Synpcc7942_1305	0.43	-1.2
1,332,590	+		Synpcc7942_1305	0.47	-1.7
1,332,598	-		Synpcc7942_1305	0.47	-3.3
1,332,627	+		Synpcc7942_1305	0.49	-2.7
1,332,642	+		Synpcc7942_1305	0.50	-2.1
1,332,655	+		Synpcc7942_1305	0.51	-2.1
1,332,695	+		Synpcc7942_1305	0.53	-0.9
1,332,698	-		Synpcc7942_1305	0.54	-2.5
1,332,721	-		Synpcc7942_1305	0.55	-1.6
1,332,731	-		Synpcc7942_1305	0.56	-1.8
1,332,731	-		Synpcc7942_1305	0.56	-2.3
1,332,738	+		Synpcc7942_1305	0.56	-1.3
1,332,738	+		Synpcc7942_1305	0.56	-2.1
1,332,738	+		Synpcc7942_1305	0.56	-2.9
1,332,738	+		Synpcc7942_1305	0.56	-1.2
1,332,738	+		Synpcc7942_1305	0.56	-2.9
1,332,738	+		Synpcc7942_1305	0.56	-2.4
1,332,744	-		Synpcc7942_1305	0.56	-2.5
1,332,746	-		Synpcc7942_1305	0.57	-1.1
1,332,771	+		Synpcc7942_1305	0.58	-3.1
1,332,855	+		Synpcc7942_1305	0.63	-5.0
1,332,855	+		Synpcc7942_1305	0.63	-2.1
1,332,855	+		Synpcc7942_1305	0.63	-2.3
1,332,863	-		Synpcc7942_1305	0.64	-4.2
1,332,902	+		Synpcc7942_1305	0.66	-3.2
1,332,955	+		Synpcc7942_1305	0.70	-3.7
1,333,026	+		Synpcc7942_1305	0.74	-2.6
1,333,031	+		Synpcc7942_1305	0.74	-3.1
1,333,039	-		Synpcc7942_1305	0.75	-4.1
1,333,042	+		Synpcc7942_1305	0.75	-2.4
1,333,049	-		Synpcc7942_1305	0.75	-0.9
1,333,050	-		Synpcc7942_1305	0.75	-1.9
1,333,052	+		Synpcc7942_1305	0.76	-0.4
1,333,060	-		Synpcc7942_1305	0.76	-4.4
1,333,087	+		Synpcc7942_1305	0.78	-0.9
1,333,087	+		Synpcc7942_1305	0.78	-1.5
1,333,090	-		Synpcc7942_1305	0.78	-2.8
1,333,120	+		Synpcc7942_1305	0.80	-2.1
1,333,120	+		Synpcc7942_1305	0.80	-1.4
1,333,128	-		Synpcc7942_1305	0.80	-2.5
1,333,141	-		Synpcc7942_1305	0.81	-2.5
1,333,201	+		Synpcc7942_1305	0.85	+0.9
1,333,219	+		Synpcc7942_1305	0.86	-2.9
1,333,222	-		Synpcc7942_1305	0.86	-0.2
1,333,222	-		Synpcc7942_1305	0.86	-3.6
1,333,222	-		Synpcc7942_1305	0.86	-1.1
1,333,231	+		Synpcc7942_1305	0.87	-1.5
1,333,239	-		Synpcc7942_1305	0.87	-1.6
1,333,253	-		Synpcc7942_1305	0.88	-2.7
1,333,301	+				-1.1
1,333,303	-				-2.0
1,333,311	-				-2.6
1,333,340	+				+0.2
1,333,348	-				-2.6
1,333,357	+				-2.6
1,333,376	-				-1.7
1,333,401	-				-2.2
1,333,431	-				-3.9
1,333,509	-				-1.1
1,334,096	+				+2.1
1,334,120	+				-1.7
1,334,185	-				+0.6
1,334,235	+				+4.6
1,334,261	-				+0.6
1,334,283	-		Synpcc7942_1307	0.12	-0.2
1,334,283	-		Synpcc7942_1307	0.12	+2.0
1,334,283	-		Synpcc7942_1307	0.12	+2.0
1,334,283	-		Synpcc7942_1307	0.12	+3.4
1,334,295	-		Synpcc7942_1307	0.14	-1.9
1,334,310	+		Synpcc7942_1307	0.16	+2.5
1,334,310	+		Synpcc7942_1307	0.16	+1.3
1,334,310	+		Synpcc7942_1307	0.16	+1.9
1,334,313	-		Synpcc7942_1307	0.16	-0.9
1,334,318	-		Synpcc7942_1307	0.17	-1.0
1,334,318	-		Synpcc7942_1307	0.17	-0.7
1,334,327	+		Synpcc7942_1307	0.18	-1.4
1,334,352	+		Synpcc7942_1307	0.21	+2.3
1,334,352	+		Synpcc7942_1307	0.21	+3.4
1,334,352	+		Synpcc7942_1307	0.21	-0.2
1,334,352	+		Synpcc7942_1307	0.21	+2.6
1,334,352	+		Synpcc7942_1307	0.21	-3.0
1,334,354	+		Synpcc7942_1307	0.21	+0.7
1,334,360	-		Synpcc7942_1307	0.22	-1.5
1,334,360	-		Synpcc7942_1307	0.22	-1.1
1,334,377	+		Synpcc7942_1307	0.24	+1.4
1,334,385	-		Synpcc7942_1307	0.25	+1.1
1,334,394	+		Synpcc7942_1307	0.26	-0.2
1,334,441	+		Synpcc7942_1307	0.32	-1.2