Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1045

Experiment: Flask grown to static phase (untill yellowing)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask grown to static phase (untill yellowing)
1,056,579	+				-0.7
1,056,581	+				-0.4
1,056,596	+				+1.3
1,056,620	+				-2.5
1,056,622	+				+0.9
1,056,630	-				-1.0
1,056,630	-				+2.9
1,056,638	-				+0.8
1,056,668	+				+1.2
1,056,676	-				+0.7
1,056,688	+				+0.5
1,056,696	-				+0.8
1,056,721	+				-1.2
1,056,729	-				-1.9
1,056,729	-				-1.0
1,057,472	+				-0.1
1,057,490	-				+2.4
1,057,490	-				+1.9
1,057,511	+				+1.6
1,057,513	+				-2.1
1,057,513	+				+1.1
1,057,523	+				-1.9
1,057,531	-				+0.6
1,057,541	+				+1.2
1,057,555	+				+0.0
1,057,557	-				+0.4
1,057,577	+				-2.0
1,057,577	+				-1.0
1,057,577	+				-2.2
1,057,644	-				-1.7
1,057,657	+				-0.8
1,057,660	-				-1.0
1,057,680	+				-1.1
1,057,680	+				-0.6
1,057,682	-				-0.6
1,057,682	-				-2.4
1,057,688	-				-0.8
1,057,722	+		Synpcc7942_1045	0.11	-1.9
1,057,730	-		Synpcc7942_1045	0.12	-3.0
1,057,732	+		Synpcc7942_1045	0.12	-1.0
1,057,732	+		Synpcc7942_1045	0.12	-3.7
1,057,740	-		Synpcc7942_1045	0.13	-1.1
1,057,740	-		Synpcc7942_1045	0.13	-0.8
1,057,746	+				-1.0
1,057,746	+		Synpcc7942_1045	0.13	-1.0
1,057,749	-		Synpcc7942_1045	0.13	-0.9
1,057,765	-		Synpcc7942_1045	0.14	-3.4
1,057,765	-		Synpcc7942_1045	0.14	+2.1
1,057,765	-		Synpcc7942_1045	0.14	+0.1
1,057,777	-		Synpcc7942_1045	0.15	-2.3
1,057,777	-		Synpcc7942_1045	0.15	-1.9
1,057,777	-		Synpcc7942_1045	0.15	-3.0
1,057,782	-		Synpcc7942_1045	0.15	-1.9
1,057,794	+		Synpcc7942_1045	0.16	-3.9
1,057,837	-		Synpcc7942_1045	0.19	-3.4
1,057,857	+		Synpcc7942_1045	0.20	-2.5
1,057,858	-		Synpcc7942_1045	0.20	-1.0
1,057,890	-		Synpcc7942_1045	0.22	-0.9
1,057,908	+		Synpcc7942_1045	0.23	+1.9
1,057,944	-		Synpcc7942_1045	0.26	-1.9
1,057,955	+		Synpcc7942_1045	0.26	-1.4
1,057,963	-		Synpcc7942_1045	0.27	+1.0
1,058,009	+		Synpcc7942_1045	0.30	-1.3
1,058,013	+		Synpcc7942_1045	0.30	+0.8
1,058,013	+		Synpcc7942_1045	0.30	-1.5
1,058,013	+		Synpcc7942_1045	0.30	-3.8
1,058,013	+		Synpcc7942_1045	0.30	-1.9
1,058,021	-		Synpcc7942_1045	0.30	-1.6
1,058,021	-		Synpcc7942_1045	0.30	-3.0
1,058,021	-		Synpcc7942_1045	0.30	-3.2
1,058,021	-		Synpcc7942_1045	0.30	-0.6
1,058,021	-		Synpcc7942_1045	0.30	-3.4
1,058,069	+		Synpcc7942_1045	0.33	-1.2
1,058,102	+		Synpcc7942_1045	0.36	-1.1
1,058,121	-		Synpcc7942_1045	0.37	-0.1
1,058,121	-		Synpcc7942_1045	0.37	-3.7
1,058,126	-		Synpcc7942_1045	0.37	-1.1
1,058,150	+		Synpcc7942_1045	0.39	-2.0
1,058,158	-		Synpcc7942_1045	0.39	-0.8
1,058,159	-		Synpcc7942_1045	0.39	+0.1
1,058,194	-		Synpcc7942_1045	0.41	-1.2
1,058,203	-		Synpcc7942_1045	0.42	-1.7
1,058,215	-		Synpcc7942_1045	0.43	-1.2
1,058,218	+		Synpcc7942_1045	0.43	-0.1
1,058,251	+		Synpcc7942_1045	0.45	-2.0
1,058,258	+		Synpcc7942_1045	0.45	+0.0
1,058,309	+		Synpcc7942_1045	0.49	-2.7
1,058,316	+		Synpcc7942_1045	0.49	-2.8
1,058,317	-		Synpcc7942_1045	0.49	-1.3
1,058,348	-		Synpcc7942_1045	0.51	-0.6
1,058,357	+		Synpcc7942_1045	0.52	-0.3
1,058,357	+		Synpcc7942_1045	0.52	+1.1
1,058,357	+		Synpcc7942_1045	0.52	+0.1
1,058,357	+		Synpcc7942_1045	0.52	-0.8
1,058,357	+		Synpcc7942_1045	0.52	-2.3
1,058,363	-		Synpcc7942_1045	0.52	+1.2
1,058,363	-		Synpcc7942_1045	0.52	-3.7
1,058,365	-		Synpcc7942_1045	0.52	-0.6
1,058,365	-		Synpcc7942_1045	0.52	+0.4
1,058,435	-		Synpcc7942_1045	0.57	-2.0
1,058,446	+		Synpcc7942_1045	0.57	+1.1
1,058,446	+		Synpcc7942_1045	0.57	-0.2
1,058,446	+		Synpcc7942_1045	0.57	-0.4
1,058,454	-		Synpcc7942_1045	0.58	-1.4
1,058,462	+		Synpcc7942_1045	0.58	-0.8
1,058,462	+		Synpcc7942_1045	0.58	+1.1
1,058,462	+		Synpcc7942_1045	0.58	-1.6
1,058,462	+		Synpcc7942_1045	0.58	-0.0
1,058,462	+		Synpcc7942_1045	0.58	-4.0
1,058,462	+		Synpcc7942_1045	0.58	+0.5
1,058,462	+		Synpcc7942_1045	0.58	+0.3
1,058,470	-		Synpcc7942_1045	0.59	-2.6
1,058,472	+		Synpcc7942_1045	0.59	-1.4
1,058,473	+		Synpcc7942_1045	0.59	-2.8
1,058,502	+		Synpcc7942_1045	0.61	-3.2
1,058,502	-		Synpcc7942_1045	0.61	+0.5
1,058,504	-		Synpcc7942_1045	0.61	-0.9
1,058,511	+		Synpcc7942_1045	0.62	-0.0
1,058,516	+		Synpcc7942_1045	0.62	-1.4
1,058,544	+		Synpcc7942_1045	0.64	-0.3
1,058,546	-		Synpcc7942_1045	0.64	-1.9
1,058,611	+		Synpcc7942_1045	0.68	-1.5
1,058,613	-		Synpcc7942_1045	0.68	-0.8
1,058,618	+		Synpcc7942_1045	0.68	-3.5
1,058,630	+		Synpcc7942_1045	0.69	-0.3
1,058,638	+		Synpcc7942_1045	0.70	-3.1
1,058,641	-				-0.3
1,058,641	-		Synpcc7942_1045	0.70	-1.4
1,058,648	+		Synpcc7942_1045	0.70	-2.3
1,058,651	-		Synpcc7942_1045	0.70	+0.3
1,058,673	-		Synpcc7942_1045	0.72	+0.9
1,058,689	-		Synpcc7942_1045	0.73	-2.7
1,058,706	+		Synpcc7942_1045	0.74	-0.6
1,058,730	+		Synpcc7942_1045	0.76	-1.9
1,058,737	+		Synpcc7942_1045	0.76	-1.4
1,058,738	-		Synpcc7942_1045	0.76	-1.3
1,058,738	-		Synpcc7942_1045	0.76	-1.3
1,058,738	-		Synpcc7942_1045	0.76	-1.4
1,058,740	-		Synpcc7942_1045	0.76	+2.0
1,058,761	+		Synpcc7942_1045	0.77	-1.9
1,058,789	+		Synpcc7942_1045	0.79	+0.0
1,058,794	+		Synpcc7942_1045	0.80	-2.1
1,058,794	+		Synpcc7942_1045	0.80	-3.7
1,058,794	+		Synpcc7942_1045	0.80	-0.3
1,058,796	+		Synpcc7942_1045	0.80	-0.5
1,058,796	+		Synpcc7942_1045	0.80	-2.7
1,058,806	+		Synpcc7942_1045	0.80	-1.5
1,058,813	-		Synpcc7942_1045	0.81	-1.5
1,058,813	-		Synpcc7942_1045	0.81	-0.4
1,058,820	+		Synpcc7942_1045	0.81	-0.1
1,058,820	+		Synpcc7942_1045	0.81	-0.3
1,058,823	+		Synpcc7942_1045	0.81	-0.2
1,058,826	-		Synpcc7942_1045	0.82	+0.8
1,058,845	+		Synpcc7942_1045	0.83	-0.0
1,058,847	+		Synpcc7942_1045	0.83	-2.2
1,058,855	-		Synpcc7942_1045	0.83	-0.4
1,058,862	-		Synpcc7942_1045	0.84	+0.0
1,058,887	-		Synpcc7942_1045	0.85	-0.9
1,058,892	-		Synpcc7942_1045	0.86	-2.2
1,058,919	-		Synpcc7942_1045	0.88	-0.4
1,058,947	-		Synpcc7942_1045	0.89	-0.7
1,059,006	-				-1.8
1,059,006	-				-0.1
1,059,008	+				+0.8
1,059,016	-				+0.1
1,059,026	+				-0.5
1,059,028	+				-2.2
1,059,028	+				-2.5
1,059,036	-				-0.8
1,059,106	-				+1.9
1,059,116	+				-2.1
1,059,116	+				-0.9
1,059,116	+				+0.6
1,059,116	+				-1.9
1,059,116	+				+1.6
1,059,116	+				-2.5
1,059,116	+				+0.8
1,059,124	-				+0.4
1,059,124	-				+1.0
1,059,124	-				+1.9
1,059,124	-				+1.1
1,059,124	-				+1.3
1,059,124	-				-0.5
1,059,124	-				-1.4
1,059,124	-				-1.3
1,059,124	-				-2.5
1,059,131	+				+2.8
1,059,141	+				-0.4
1,059,167	+				+0.2
1,059,175	-				-1.7
1,059,175	-				+0.5
1,059,224	+				+1.0
1,059,225	+				+1.4
1,059,233	-				-0.7
1,059,246	-				+1.6
1,059,268	+				-1.2
1,059,268	+				+1.8
1,059,268	+				-0.5
1,059,276	-				+1.1
1,059,276	-				+0.3
1,059,276	-				+1.8
1,059,282	+				+1.0
1,059,282	+				+1.6
1,059,287	+				-0.8
1,059,287	+				-0.8
1,059,290	-				+0.2
1,059,295	+				+1.3
1,059,295	-				+1.0
1,059,295	-				-0.3
1,059,295	-				+0.1
1,059,303	-				-2.0
1,059,313	-		Synpcc7942_1046	0.12	-1.0
1,059,313	-		Synpcc7942_1046	0.12	-0.7
1,059,314	+		Synpcc7942_1046	0.12	+2.9
1,059,354	+		Synpcc7942_1046	0.22	+1.7
1,059,357	-		Synpcc7942_1046	0.22	+1.8
1,059,362	-		Synpcc7942_1046	0.24	-0.9
1,059,387	+		Synpcc7942_1046	0.29	-0.8
1,059,429	+		Synpcc7942_1046	0.39	+2.0
1,059,444	+		Synpcc7942_1046	0.43	+0.5
1,059,452	+		Synpcc7942_1046	0.45	+1.8
1,059,458	+		Synpcc7942_1046	0.46	+1.8
1,059,469	+		Synpcc7942_1046	0.48	-2.1
1,059,471	-		Synpcc7942_1046	0.49	+0.5
1,059,477	-				+0.2
1,059,482	-		Synpcc7942_1046	0.52	-0.7
1,059,491	+		Synpcc7942_1046	0.54	+1.7
1,059,492	+		Synpcc7942_1046	0.54	+2.9
1,059,492	+		Synpcc7942_1046	0.54	-1.6
1,059,501	+		Synpcc7942_1046	0.56	-0.6
1,059,519	-		Synpcc7942_1046	0.60	+0.2
1,059,523	-		Synpcc7942_1046	0.61	-1.9
1,059,595	-		Synpcc7942_1046	0.78	+2.0
1,059,600	+		Synpcc7942_1046	0.79	+2.2
1,059,600	+		Synpcc7942_1046	0.79	+0.7
1,059,600	+		Synpcc7942_1046	0.79	-2.4
1,059,608	-		Synpcc7942_1046	0.81	+0.5
1,059,621	+		Synpcc7942_1046	0.84	+2.0
1,059,622	+		Synpcc7942_1046	0.84	+0.0
1,059,681	+				+0.0
1,059,683	+				+3.6
1,059,690	+				-1.3
1,059,705	-				-1.1
1,059,722	-				-1.9
1,059,722	-				+0.7
1,059,857	+				-0.9
1,059,857	+				-1.9
1,059,865	-				+2.3
1,059,926	+				+0.5
1,059,946	-				+2.2
1,059,956	-				-1.4
1,060,000	-				-1.6
1,060,016	-				+0.2
1,060,075	+				-2.3
1,060,112	-				-1.8
1,060,112	-				-1.5
1,060,112	-				-2.3
1,060,112	-				-2.4