Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_89

Experiment: D-Glucosamine Hydrochloride (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt Pf6N2E2_89 - hypothetical protein, at 133,849 to 134,004 _89 Position (kb) 133 134 135Strain fitness (log2 ratio) -2 -1 0 1 2 3at 132.912 kb on + strandat 132.921 kb on - strandat 132.921 kb on - strandat 132.921 kb on - strandat 132.999 kb on + strandat 132.999 kb on + strandat 133.037 kb on + strandat 133.037 kb on + strandat 133.038 kb on - strandat 133.096 kb on + strandat 133.096 kb on + strandat 133.146 kb on + strandat 133.146 kb on + strandat 133.146 kb on + strandat 133.146 kb on + strandat 133.146 kb on + strandat 133.146 kb on + strandat 133.146 kb on + strandat 133.146 kb on + strandat 133.146 kb on + strandat 133.146 kb on + strandat 133.146 kb on + strandat 133.147 kb on - strandat 133.147 kb on - strandat 133.147 kb on - strandat 133.147 kb on - strandat 133.147 kb on - strandat 133.147 kb on - strandat 133.147 kb on - strandat 133.198 kb on + strandat 133.285 kb on + strandat 133.303 kb on + strandat 133.304 kb on - strandat 133.307 kb on + strandat 133.372 kb on + strandat 133.415 kb on + strandat 133.452 kb on - strandat 133.459 kb on + strandat 133.460 kb on - strandat 133.491 kb on - strandat 133.558 kb on + strandat 133.558 kb on + strandat 133.603 kb on - strandat 133.660 kb on - strandat 133.672 kb on - strandat 133.678 kb on - strandat 133.720 kb on - strandat 133.842 kb on + strandat 133.842 kb on + strandat 133.843 kb on - strandat 133.850 kb on + strandat 133.850 kb on + strandat 133.851 kb on - strandat 133.851 kb on - strandat 133.851 kb on - strandat 133.853 kb on + strandat 133.853 kb on + strandat 133.853 kb on + strandat 133.853 kb on + strandat 133.854 kb on - strandat 133.854 kb on - strandat 133.854 kb on - strandat 133.854 kb on - strandat 133.911 kb on + strand, within Pf6N2E2_89at 133.948 kb on + strand, within Pf6N2E2_89at 133.949 kb on - strand, within Pf6N2E2_89at 134.009 kb on + strandat 134.023 kb on + strandat 134.023 kb on + strandat 134.023 kb on + strandat 134.024 kb on - strandat 134.129 kb on + strandat 134.156 kb on + strandat 134.273 kb on - strandat 134.292 kb on + strandat 134.292 kb on + strandat 134.293 kb on - strandat 134.353 kb on - strandat 134.439 kb on - strandat 134.480 kb on + strandat 134.481 kb on - strandat 134.481 kb on - strandat 134.482 kb on + strandat 134.482 kb on + strandat 134.583 kb on + strandat 134.583 kb on + strandat 134.583 kb on + strandat 134.584 kb on - strandat 134.587 kb on + strandat 134.587 kb on + strandat 134.588 kb on - strandat 134.588 kb on - strandat 134.620 kb on - strandat 134.679 kb on + strandat 134.679 kb on + strandat 134.680 kb on - strandat 134.680 kb on - strandat 134.695 kb on - strandat 134.727 kb on + strandat 134.775 kb on + strandat 134.775 kb on + strandat 134.775 kb on + strandat 134.776 kb on - strandat 134.776 kb on - strandat 134.776 kb on - strandat 134.908 kb on + strandat 134.908 kb on + strandat 134.957 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (C)
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132,912 + +0.2
132,921 - +3.5
132,921 - +1.5
132,921 - +0.2
132,999 + +0.2
132,999 + +0.8
133,037 + -2.1
133,037 + +1.1
133,038 - +0.1
133,096 + +1.6
133,096 + +1.2
133,146 + -0.5
133,146 + +1.6
133,146 + +1.8
133,146 + +0.7
133,146 + +2.3
133,146 + +0.4
133,146 + +0.2
133,146 + +0.6
133,146 + -0.9
133,146 + +0.3
133,146 + -1.6
133,147 - -0.6
133,147 - -0.5
133,147 - -0.1
133,147 - +0.2
133,147 - -1.1
133,147 - -0.5
133,147 - +0.4
133,198 + +0.0
133,285 + -1.8
133,303 + +1.2
133,304 - +1.0
133,307 + +2.1
133,372 + -0.6
133,415 + -0.6
133,452 - +0.9
133,459 + +0.2
133,460 - +1.6
133,491 - +0.9
133,558 + +0.7
133,558 + +0.3
133,603 - -0.1
133,660 - +0.4
133,672 - -1.1
133,678 - -1.4
133,720 - +0.6
133,842 + +0.1
133,842 + +0.1
133,843 - +0.5
133,850 + +0.3
133,850 + +0.3
133,851 - +0.7
133,851 - +0.0
133,851 - -0.3
133,853 + -2.1
133,853 + +0.8
133,853 + +0.2
133,853 + -0.6
133,854 - -0.6
133,854 - +0.7
133,854 - +1.3
133,854 - -0.2
133,911 + Pf6N2E2_89 0.40 -1.6
133,948 + Pf6N2E2_89 0.63 +1.5
133,949 - Pf6N2E2_89 0.64 -2.2
134,009 + -1.0
134,023 + -0.1
134,023 + +0.5
134,023 + -0.3
134,024 - +0.5
134,129 + -0.8
134,156 + -0.6
134,273 - +0.9
134,292 + +0.4
134,292 + +0.8
134,293 - -0.8
134,353 - -0.4
134,439 - +0.4
134,480 + +1.2
134,481 - -1.3
134,481 - +1.3
134,482 + +1.1
134,482 + +0.4
134,583 + +0.7
134,583 + +0.2
134,583 + +0.2
134,584 - +0.1
134,587 + +0.5
134,587 + +0.9
134,588 - -0.6
134,588 - -0.6
134,620 - +0.6
134,679 + +0.7
134,679 + -0.7
134,680 - +1.7
134,680 - -1.5
134,695 - +0.7
134,727 + +0.6
134,775 + +0.6
134,775 + +0.6
134,775 + +0.1
134,776 - +0.9
134,776 - +0.4
134,776 - -0.6
134,908 + -0.8
134,908 + -0.2
134,957 - +0.9

Or see this region's nucleotide sequence