Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4009

Experiment: D-Glucosamine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride (C)
4,677,649	+				+1.3
4,677,649	+				-1.8
4,677,649	+				-0.6
4,677,649	+				+0.2
4,677,649	+				-1.0
4,677,649	+				-0.4
4,677,650	-				-1.5
4,677,650	-				+0.6
4,677,650	-				+0.5
4,677,660	+				+0.5
4,677,660	+				+0.7
4,677,660	+				+0.5
4,677,660	+				+0.4
4,677,661	-				-0.2
4,677,672	+				+0.4
4,677,672	+				-0.4
4,677,673	-				+0.8
4,677,739	+				-0.1
4,677,740	-				-0.7
4,677,740	-				-0.5
4,677,751	+				+0.7
4,677,777	-				-0.7
4,677,791	+				-0.1
4,677,854	+				+2.5
4,677,854	+				+1.2
4,677,854	+				-0.1
4,677,854	+				-0.2
4,677,854	+				+0.7
4,677,854	+				-1.4
4,677,854	+				+0.7
4,677,855	-				+0.2
4,677,855	-				-1.2
4,677,855	-				-0.2
4,677,855	-				+0.1
4,677,855	-				+1.6
4,677,855	-				+0.5
4,677,855	-				+0.5
4,677,855	-				+1.6
4,677,855	-				+2.9
4,677,858	+				+0.2
4,677,858	+				+0.9
4,677,858	+				+1.7
4,677,858	+				+1.3
4,677,859	-				+0.3
4,677,859	-				+1.0
4,677,859	-				+0.5
4,677,859	-				+0.3
4,677,859	-				+1.1
4,677,859	-				+0.6
4,677,859	-				-0.7
4,677,859	-				-1.5
4,677,859	-				+0.6
4,677,911	+				-0.1
4,677,912	-				+0.8
4,677,912	-				+0.3
4,677,915	+				-1.1
4,677,915	+				-0.4
4,677,915	+				+1.6
4,677,915	+				+0.2
4,677,915	+				+0.9
4,677,915	+				+0.2
4,677,915	+				+0.3
4,677,915	+				-0.5
4,677,915	+				+0.1
4,677,915	+				+1.0
4,677,915	+				+0.3
4,677,915	+				+0.9
4,677,916	-				+0.2
4,677,916	-				-1.0
4,677,916	-				+0.0
4,677,916	-				-1.4
4,677,916	-				+0.1
4,677,916	-				+0.1
4,677,916	-				+0.3
4,677,916	-				-0.0
4,677,916	-				+1.1
4,677,916	-				-0.2
4,677,916	-				+1.0
4,677,916	-				+0.7
4,677,916	-				+0.7
4,677,916	-				+0.5
4,677,916	-				+0.8
4,677,916	-				-1.7
4,677,916	-				+1.5
4,677,916	-				+1.0
4,677,916	-				+0.1
4,677,916	-				+1.3
4,677,920	+				+0.5
4,677,920	+				+0.6
4,677,920	+				-0.4
4,677,921	-				+0.9
4,677,921	-				+0.2
4,677,921	-				-0.9
4,677,921	-				+1.1
4,677,921	-				-1.1
4,677,921	-				-1.1
4,677,921	-				+0.5
4,677,921	-				+0.6
4,678,023	+		Pf6N2E2_4008	0.27	+1.3
4,678,023	+		Pf6N2E2_4008	0.27	-0.1
4,678,023	+		Pf6N2E2_4008	0.27	+0.9
4,678,026	+		Pf6N2E2_4008	0.27	-0.5
4,678,026	+		Pf6N2E2_4008	0.27	+1.6
4,678,026	+		Pf6N2E2_4008	0.27	+0.1
4,678,027	-		Pf6N2E2_4008	0.28	+1.3
4,678,027	-		Pf6N2E2_4008	0.28	+0.4
4,678,027	-		Pf6N2E2_4008	0.28	+0.5
4,678,027	-		Pf6N2E2_4008	0.28	+0.7
4,678,097	-		Pf6N2E2_4008	0.46	-0.4
4,678,097	-		Pf6N2E2_4008	0.46	+0.0
4,678,097	-		Pf6N2E2_4008	0.46	+0.1
4,678,097	-		Pf6N2E2_4008	0.46	-0.1
4,678,507	+				+1.1
4,678,507	+				+0.2
4,678,508	-				-1.3
4,678,508	-				-0.1
4,678,508	-				-1.8
4,678,508	-				+0.3
4,678,511	+				-1.5
4,678,512	-				-0.3
4,678,512	-				-0.3
4,678,512	-				-0.0
4,678,512	-				+0.3
4,678,512	-				-0.6
4,678,512	-				+1.2
4,678,695	+				-1.5
4,678,696	-				-1.9
4,678,804	-		Pf6N2E2_4009	0.14	-2.0
4,678,991	+		Pf6N2E2_4009	0.24	-2.4
4,678,991	+		Pf6N2E2_4009	0.24	+0.9
4,678,991	+		Pf6N2E2_4009	0.24	-1.0
4,678,991	+		Pf6N2E2_4009	0.24	+0.6
4,678,991	+		Pf6N2E2_4009	0.24	-0.8
4,678,991	+		Pf6N2E2_4009	0.24	-1.2
4,678,991	+		Pf6N2E2_4009	0.24	-1.8
4,678,991	+		Pf6N2E2_4009	0.24	-2.9
4,678,991	+		Pf6N2E2_4009	0.24	-2.0
4,678,992	-		Pf6N2E2_4009	0.24	-2.0
4,678,992	-		Pf6N2E2_4009	0.24	-1.5
4,678,992	-		Pf6N2E2_4009	0.24	-2.3
4,678,992	-		Pf6N2E2_4009	0.24	-0.5
4,678,992	-		Pf6N2E2_4009	0.24	-0.8
4,679,023	+		Pf6N2E2_4009	0.25	-1.7
4,679,023	+		Pf6N2E2_4009	0.25	-1.5
4,679,023	+		Pf6N2E2_4009	0.25	-1.4
4,679,131	-		Pf6N2E2_4009	0.31	-2.0
4,679,131	-		Pf6N2E2_4009	0.31	-1.0
4,679,342	+		Pf6N2E2_4009	0.42	-1.0
4,679,342	+		Pf6N2E2_4009	0.42	-3.1
4,679,343	-		Pf6N2E2_4009	0.42	+0.0
4,679,512	+		Pf6N2E2_4009	0.51	-1.5
4,679,512	+		Pf6N2E2_4009	0.51	-1.1
4,679,513	-		Pf6N2E2_4009	0.51	-2.2
4,679,513	-		Pf6N2E2_4009	0.51	-1.0
4,679,513	-		Pf6N2E2_4009	0.51	-1.6
4,679,831	+		Pf6N2E2_4009	0.68	-1.1
4,679,831	+		Pf6N2E2_4009	0.68	-1.2
4,679,831	+		Pf6N2E2_4009	0.68	+0.0
4,679,889	-		Pf6N2E2_4009	0.71	-1.5
4,679,889	-		Pf6N2E2_4009	0.71	+1.1
4,679,889	-		Pf6N2E2_4009	0.71	-0.6
4,680,012	+		Pf6N2E2_4009	0.77	-1.8
4,680,012	+		Pf6N2E2_4009	0.77	-1.5
4,680,013	-		Pf6N2E2_4009	0.77	-1.8
4,680,013	-		Pf6N2E2_4009	0.77	-1.1
4,680,013	-		Pf6N2E2_4009	0.77	-2.0
4,680,026	+		Pf6N2E2_4009	0.78	+0.3
4,680,026	+		Pf6N2E2_4009	0.78	-2.2
4,680,361	+				+2.9
4,680,361	+				-1.0
4,680,404	+				+1.0
4,680,404	+				-0.9
4,680,405	-				+2.9
4,680,405	-				-2.0
4,680,405	-				-1.6
4,680,405	-				-0.3
4,680,405	-				+0.2
4,680,437	+				-1.5
4,680,437	+				+0.7
4,680,438	-				-0.4
4,680,438	-				-0.5
4,680,438	-				+0.0
4,680,483	-				+0.5
4,680,484	+				-0.8
4,680,484	+				-0.3
4,680,484	+				-0.1
4,680,484	+				-1.0
4,680,484	+				-2.6
4,680,484	+				+1.3
4,680,485	-				-0.5
4,680,485	-				+0.9
4,680,485	-				-0.6
4,680,485	-				-1.4
4,680,510	+				-0.7
4,680,510	+				-1.2
4,680,510	+				-0.4
4,680,510	+				+0.3
4,680,510	+				-0.2
4,680,511	-				-0.1
4,680,532	+				+0.8
4,680,532	+				-2.3
4,680,532	+				-0.1
4,680,532	+				-0.0
4,680,533	-				+0.3
4,680,533	-				+0.6
4,680,533	-				-1.3
4,680,551	-				+0.9
4,680,568	+				+0.4
4,680,568	+				+0.4
4,680,587	-				+0.6
4,680,593	+				+1.0
4,680,593	+				+0.7
4,680,593	+				-0.2
4,680,593	+				-0.4
4,680,593	+				-0.5
4,680,594	-				+0.6
4,680,594	-				+0.9
4,680,594	-				+0.4
4,680,594	-				+0.6
4,680,594	-				-0.4
4,680,594	-				-0.8
4,680,594	-				-0.2
4,680,594	-				+1.1
4,680,594	-				-1.3
4,680,600	+				-1.1
4,680,600	+				+0.9
4,680,601	-				+0.5
4,680,687	+				-0.2
4,680,687	+				-0.1
4,680,688	-				+1.4
4,680,688	-				-0.8
4,680,688	-				+0.0
4,680,901	-		Pf6N2E2_4010	0.26	-0.4
4,680,940	-		Pf6N2E2_4010	0.29	-0.1
4,680,981	+		Pf6N2E2_4010	0.33	+0.4
4,680,982	-		Pf6N2E2_4010	0.33	+0.2
4,680,982	-		Pf6N2E2_4010	0.33	-0.6
4,680,982	-		Pf6N2E2_4010	0.33	-0.5
4,681,059	-		Pf6N2E2_4010	0.39	+0.3
4,681,059	-		Pf6N2E2_4010	0.39	-1.7
4,681,059	-		Pf6N2E2_4010	0.39	+0.3
4,681,059	-		Pf6N2E2_4010	0.39	-0.9
4,681,228	-		Pf6N2E2_4010	0.54	-0.4