Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS21900

Experiment: R2A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A
5,378,304	-				+0.9
5,378,319	+				-1.6
5,378,336	-				-0.4
5,378,395	+				-1.4
5,378,398	+				+0.1
5,378,404	+				-1.0
5,378,439	-				-0.5
5,378,448	-				+0.2
5,378,503	-				-0.8
5,378,685	-				+0.1
5,378,747	+				+1.1
5,378,814	+		CA265_RS21900	0.11	-0.4
5,378,815	-		CA265_RS21900	0.11	-0.7
5,378,969	-		CA265_RS21900	0.15	-1.6
5,378,992	-		CA265_RS21900	0.16	+0.1
5,379,009	+		CA265_RS21900	0.16	+1.1
5,379,056	+		CA265_RS21900	0.17	+0.2
5,379,057	-		CA265_RS21900	0.17	-1.1
5,379,173	+		CA265_RS21900	0.20	+0.1
5,379,194	+		CA265_RS21900	0.21	-0.5
5,379,222	+		CA265_RS21900	0.22	-1.8
5,379,249	-		CA265_RS21900	0.22	-0.3
5,379,250	+		CA265_RS21900	0.22	-0.6
5,379,250	+		CA265_RS21900	0.22	+2.1
5,379,251	-		CA265_RS21900	0.22	-1.4
5,379,331	+		CA265_RS21900	0.25	-1.0
5,379,332	-		CA265_RS21900	0.25	-1.2
5,379,352	-		CA265_RS21900	0.25	-1.3
5,379,477	+		CA265_RS21900	0.29	-0.6
5,379,502	-		CA265_RS21900	0.29	+0.4
5,379,502	-		CA265_RS21900	0.29	-0.4
5,379,597	-		CA265_RS21900	0.32	+0.1
5,379,609	-		CA265_RS21900	0.32	-0.1
5,379,622	-		CA265_RS21900	0.32	-0.8
5,379,667	-		CA265_RS21900	0.34	-1.5
5,379,811	-		CA265_RS21900	0.37	-0.0
5,379,811	-		CA265_RS21900	0.37	+0.6
5,379,824	-		CA265_RS21900	0.38	+1.7
5,379,835	-		CA265_RS21900	0.38	-0.3
5,379,844	-		CA265_RS21900	0.38	-0.4
5,379,910	-		CA265_RS21900	0.40	-0.9
5,379,949	-		CA265_RS21900	0.41	+0.0
5,379,965	-		CA265_RS21900	0.42	+0.3
5,380,014	+		CA265_RS21900	0.43	+0.9
5,380,025	+		CA265_RS21900	0.43	-0.9
5,380,025	+		CA265_RS21900	0.43	-0.9
5,380,026	-		CA265_RS21900	0.43	-1.5
5,380,045	+		CA265_RS21900	0.44	+0.8
5,380,061	-		CA265_RS21900	0.44	-0.9
5,380,066	+		CA265_RS21900	0.44	+2.7
5,380,229	+		CA265_RS21900	0.49	-1.5
5,380,230	-		CA265_RS21900	0.49	+0.1
5,380,283	-		CA265_RS21900	0.50	-0.2
5,380,285	-		CA265_RS21900	0.50	-1.0
5,380,285	-		CA265_RS21900	0.50	-0.7
5,380,289	-		CA265_RS21900	0.50	-0.9
5,380,289	-		CA265_RS21900	0.50	+0.5
5,380,289	-		CA265_RS21900	0.50	-0.7
5,380,291	-		CA265_RS21900	0.50	+0.6
5,380,370	-		CA265_RS21900	0.52	+0.9
5,380,405	+		CA265_RS21900	0.53	+0.2
5,380,435	-		CA265_RS21900	0.54	-1.2
5,380,464	+		CA265_RS21900	0.55	-1.5
5,380,494	-		CA265_RS21900	0.56	-0.7
5,380,550	-		CA265_RS21900	0.57	-0.4
5,380,590	-		CA265_RS21900	0.58	-2.3
5,380,616	-		CA265_RS21900	0.59	-1.2
5,380,625	+		CA265_RS21900	0.59	-1.9
5,380,641	+		CA265_RS21900	0.60	-1.6
5,380,669	-		CA265_RS21900	0.60	-0.1
5,380,714	-		CA265_RS21900	0.62	+0.5
5,380,765	-		CA265_RS21900	0.63	+0.3
5,380,786	+		CA265_RS21900	0.64	+1.3
5,380,789	+		CA265_RS21900	0.64	-1.5
5,380,962	-		CA265_RS21900	0.68	-0.5
5,381,011	-		CA265_RS21900	0.70	+0.3
5,381,086	-		CA265_RS21900	0.72	+0.1
5,381,119	+		CA265_RS21900	0.73	-0.4
5,381,158	-		CA265_RS21900	0.74	+0.2
5,381,188	+		CA265_RS21900	0.74	+0.3
5,381,206	+		CA265_RS21900	0.75	-1.1
5,381,207	-		CA265_RS21900	0.75	-1.6
5,381,209	-		CA265_RS21900	0.75	+0.2
5,381,235	+		CA265_RS21900	0.76	-0.2
5,381,249	+		CA265_RS21900	0.76	-1.8
5,381,249	+		CA265_RS21900	0.76	-0.2
5,381,249	+		CA265_RS21900	0.76	-0.8
5,381,249	+		CA265_RS21900	0.76	-0.2
5,381,250	-				+1.1
5,381,250	-		CA265_RS21900	0.76	-1.9
5,381,250	-		CA265_RS21900	0.76	+0.0
5,381,252	-		CA265_RS21900	0.76	+1.7
5,381,343	+		CA265_RS21900	0.79	-1.7
5,381,379	-		CA265_RS21900	0.79	+0.7
5,381,408	+		CA265_RS21900	0.80	-0.7
5,381,419	+		CA265_RS21900	0.81	-0.5
5,381,420	-		CA265_RS21900	0.81	-1.0
5,381,420	-		CA265_RS21900	0.81	-0.2
5,381,421	+		CA265_RS21900	0.81	-0.7
5,381,422	-		CA265_RS21900	0.81	-1.0
5,381,428	-		CA265_RS21900	0.81	-2.9
5,381,458	-		CA265_RS21900	0.82	+0.1
5,381,613	+		CA265_RS21900	0.86	+1.7
5,381,619	+		CA265_RS21900	0.86	+2.1
5,381,856	-				+0.8
5,381,859	+				-0.9
5,381,905	-				-0.7
5,381,938	+				-1.2
5,381,938	+				+0.1
5,381,941	-				+0.6
5,381,968	-				-0.2
5,381,993	+				+0.1
5,382,036	-				+0.1
5,382,142	+				-0.9
5,382,152	+				-0.2
5,382,171	+				+0.1
5,382,247	+				+1.6
5,382,247	+				-0.1
5,382,248	-				-1.4
5,382,248	-				+0.9
5,382,250	-				-0.7
5,382,250	-				+0.1
5,382,251	+				-0.6
5,382,251	+				-1.2
5,382,294	+		CA265_RS21905	0.12	-0.7
5,382,294	+		CA265_RS21905	0.12	-0.0
5,382,295	-		CA265_RS21905	0.12	+0.0
5,382,295	-		CA265_RS21905	0.12	-0.5
5,382,295	-		CA265_RS21905	0.12	+0.4
5,382,329	-		CA265_RS21905	0.16	-0.9
5,382,347	-		CA265_RS21905	0.18	+1.0
5,382,421	-		CA265_RS21905	0.26	-0.4
5,382,569	+		CA265_RS21905	0.42	+0.1
5,382,620	+		CA265_RS21905	0.48	+0.0
5,382,635	-		CA265_RS21905	0.50	-0.2
5,382,691	+		CA265_RS21905	0.56	-2.6
5,382,817	+		CA265_RS21905	0.70	-1.0
5,382,955	+		CA265_RS21905	0.85	-0.5
5,382,955	+		CA265_RS21905	0.85	-1.6
5,383,002	+				+0.5
5,383,002	+				+0.1
5,383,020	-				+0.5
5,383,061	-				+1.1
5,383,070	-				-1.9
5,383,094	+				+0.4
5,383,119	+				+0.3
5,383,122	+				-0.4
5,383,140	-				+2.1
5,383,144	-				+3.4