Experiment: R2A
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02755 and CA265_RS02760 are separated by 31 nucleotides CA265_RS02760 and CA265_RS02765 are separated by 33 nucleotides CA265_RS02765 and CA265_RS02770 are separated by 332 nucleotides
CA265_RS02755: CA265_RS02755 - phenylalanine--tRNA ligase subunit beta, at 691,675 to 694,074
_RS02755
CA265_RS02760: CA265_RS02760 - hypothetical protein, at 694,106 to 694,396
_RS02760
CA265_RS02765: CA265_RS02765 - cell division protein ZapA, at 694,430 to 694,720
_RS02765
CA265_RS02770: CA265_RS02770 - ribonuclease Y, at 695,053 to 696,624
_RS02770
Position (kb) 694
695 Strain fitness (log2 ratio) -1
0
1 at 694.099 kb on + strand at 694.132 kb on + strand at 694.137 kb on + strand, within CA265_RS02760 at 694.167 kb on + strand, within CA265_RS02760 at 694.171 kb on + strand, within CA265_RS02760 at 694.300 kb on + strand, within CA265_RS02760 at 694.418 kb on + strand at 694.472 kb on + strand, within CA265_RS02765 at 694.558 kb on + strand, within CA265_RS02765 at 694.610 kb on + strand, within CA265_RS02765 at 694.644 kb on + strand, within CA265_RS02765 at 694.695 kb on + strand at 694.702 kb on + strand at 694.738 kb on + strand at 694.772 kb on + strand at 694.810 kb on + strand at 694.918 kb on + strand at 694.918 kb on + strand at 694.948 kb on + strand at 694.979 kb on + strand at 694.979 kb on + strand at 694.979 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A remove 694,099 + -0.5 694,132 + +0.3 694,137 + CA265_RS02760 0.11 -1.1 694,167 + CA265_RS02760 0.21 -0.3 694,171 + CA265_RS02760 0.22 -0.5 694,300 + CA265_RS02760 0.67 -0.3 694,418 + -0.4 694,472 + CA265_RS02765 0.14 +0.0 694,558 + CA265_RS02765 0.44 -1.6 694,610 + CA265_RS02765 0.62 +0.5 694,644 + CA265_RS02765 0.74 -1.4 694,695 + -0.3 694,702 + -0.9 694,738 + -0.1 694,772 + -0.7 694,810 + +0.5 694,918 + +0.1 694,918 + -0.1 694,948 + -0.1 694,979 + +0.6 694,979 + +0.7 694,979 + +0.4
Or see this region's nucleotide sequence