Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_381 and Ac3H11_566 are separated by 178 nucleotides Ac3H11_566 and Ac3H11_382 are separated by 194 nucleotides Ac3H11_382 and Ac3H11_383 are separated by 305 nucleotides
Ac3H11_381 - Integrase, at 57,558 to 58,805
_381
Ac3H11_566 - tRNA-Arg-TCT, at 58,984 to 59,057
_566
Ac3H11_382 - TrkA-N:Sodium/hydrogen exchanger, at 59,252 to 60,991
_382
Ac3H11_383 - FIG01198699: hypothetical protein, at 61,297 to 63,186
_383
Position (kb)
59
60
61 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 58.336 kb on - strand, within Ac3H11_381 at 58.336 kb on - strand, within Ac3H11_381 at 58.336 kb on - strand, within Ac3H11_381 at 58.399 kb on + strand, within Ac3H11_381 at 58.400 kb on - strand, within Ac3H11_381 at 58.429 kb on - strand, within Ac3H11_381 at 58.429 kb on - strand, within Ac3H11_381 at 58.444 kb on + strand, within Ac3H11_381 at 58.445 kb on - strand, within Ac3H11_381 at 58.518 kb on + strand, within Ac3H11_381 at 58.518 kb on + strand, within Ac3H11_381 at 58.519 kb on - strand, within Ac3H11_381 at 58.519 kb on - strand, within Ac3H11_381 at 58.563 kb on + strand, within Ac3H11_381 at 58.563 kb on + strand, within Ac3H11_381 at 58.563 kb on + strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.564 kb on - strand, within Ac3H11_381 at 58.633 kb on + strand, within Ac3H11_381 at 58.675 kb on + strand, within Ac3H11_381 at 58.675 kb on + strand, within Ac3H11_381 at 58.676 kb on - strand, within Ac3H11_381 at 58.676 kb on - strand, within Ac3H11_381 at 58.676 kb on - strand, within Ac3H11_381 at 58.676 kb on - strand, within Ac3H11_381 at 58.690 kb on + strand at 58.690 kb on + strand at 58.690 kb on + strand at 58.691 kb on - strand at 58.691 kb on - strand at 58.691 kb on - strand at 58.691 kb on - strand at 58.691 kb on - strand at 58.691 kb on - strand at 58.691 kb on - strand at 58.718 kb on - strand at 58.718 kb on - strand at 58.782 kb on + strand at 58.782 kb on + strand at 58.796 kb on + strand at 58.823 kb on + strand at 58.877 kb on + strand at 58.877 kb on + strand at 58.877 kb on + strand at 58.878 kb on - strand at 58.933 kb on - strand at 58.977 kb on + strand at 58.977 kb on + strand at 58.978 kb on - strand at 59.081 kb on - strand at 59.197 kb on - strand at 59.198 kb on + strand at 59.198 kb on + strand at 59.198 kb on + strand at 59.198 kb on + strand at 59.199 kb on - strand at 59.199 kb on - strand at 59.357 kb on + strand at 59.560 kb on + strand, within Ac3H11_382 at 59.560 kb on + strand, within Ac3H11_382 at 59.561 kb on - strand, within Ac3H11_382 at 59.684 kb on + strand, within Ac3H11_382 at 59.684 kb on + strand, within Ac3H11_382 at 59.684 kb on + strand, within Ac3H11_382 at 59.684 kb on + strand, within Ac3H11_382 at 59.684 kb on + strand, within Ac3H11_382 at 59.684 kb on + strand, within Ac3H11_382 at 59.684 kb on + strand, within Ac3H11_382 at 59.685 kb on - strand, within Ac3H11_382 at 59.685 kb on - strand, within Ac3H11_382 at 59.685 kb on - strand, within Ac3H11_382 at 59.685 kb on - strand, within Ac3H11_382 at 59.685 kb on - strand, within Ac3H11_382 at 59.685 kb on - strand, within Ac3H11_382 at 59.685 kb on - strand, within Ac3H11_382 at 60.367 kb on - strand, within Ac3H11_382 at 60.554 kb on + strand, within Ac3H11_382 at 60.555 kb on - strand, within Ac3H11_382 at 60.564 kb on + strand, within Ac3H11_382 at 60.576 kb on + strand, within Ac3H11_382 at 60.576 kb on + strand at 60.576 kb on + strand, within Ac3H11_382 at 60.576 kb on + strand, within Ac3H11_382 at 60.576 kb on + strand, within Ac3H11_382 at 60.577 kb on - strand, within Ac3H11_382 at 60.687 kb on + strand, within Ac3H11_382 at 60.688 kb on - strand, within Ac3H11_382 at 60.868 kb on + strand at 60.868 kb on + strand at 60.869 kb on - strand at 60.869 kb on - strand at 60.869 kb on - strand at 60.869 kb on - strand at 60.879 kb on + strand at 60.879 kb on + strand at 60.879 kb on + strand at 60.880 kb on - strand at 60.880 kb on - strand at 60.880 kb on - strand at 61.298 kb on + strand at 61.298 kb on + strand at 61.299 kb on - strand at 61.299 kb on - strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.383 kb on - strand at 61.383 kb on - strand at 61.383 kb on - strand at 61.383 kb on - strand at 61.383 kb on - strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.581 kb on - strand, within Ac3H11_383
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 58,336 - Ac3H11_381 0.62 -0.6 58,336 - Ac3H11_381 0.62 +0.2 58,336 - Ac3H11_381 0.62 +1.3 58,399 + Ac3H11_381 0.67 -0.1 58,400 - Ac3H11_381 0.67 +0.4 58,429 - Ac3H11_381 0.70 +0.6 58,429 - Ac3H11_381 0.70 -0.2 58,444 + Ac3H11_381 0.71 +1.3 58,445 - Ac3H11_381 0.71 +1.6 58,518 + Ac3H11_381 0.77 -0.5 58,518 + Ac3H11_381 0.77 +0.6 58,519 - Ac3H11_381 0.77 -0.5 58,519 - Ac3H11_381 0.77 +1.1 58,563 + Ac3H11_381 0.81 +0.2 58,563 + Ac3H11_381 0.81 -2.4 58,563 + Ac3H11_381 0.81 +1.9 58,564 - Ac3H11_381 0.81 +0.0 58,564 - Ac3H11_381 0.81 -1.4 58,564 - Ac3H11_381 0.81 -0.4 58,564 - Ac3H11_381 0.81 -0.9 58,564 - Ac3H11_381 0.81 +0.1 58,564 - Ac3H11_381 0.81 -0.4 58,564 - Ac3H11_381 0.81 -1.6 58,564 - Ac3H11_381 0.81 -2.2 58,633 + Ac3H11_381 0.86 -1.8 58,675 + Ac3H11_381 0.90 -0.8 58,675 + Ac3H11_381 0.90 -0.0 58,676 - Ac3H11_381 0.90 -0.1 58,676 - Ac3H11_381 0.90 -1.1 58,676 - Ac3H11_381 0.90 +1.2 58,676 - Ac3H11_381 0.90 -2.8 58,690 + +1.3 58,690 + -0.6 58,690 + -0.3 58,691 - -0.7 58,691 - +0.3 58,691 - -2.6 58,691 - +0.4 58,691 - +0.9 58,691 - -2.0 58,691 - -1.4 58,718 - +2.0 58,718 - -2.5 58,782 + +0.2 58,782 + +0.7 58,796 + +1.2 58,823 + +0.0 58,877 + +1.6 58,877 + +0.9 58,877 + +1.3 58,878 - +0.7 58,933 - -0.0 58,977 + -2.1 58,977 + +0.3 58,978 - -1.3 59,081 - -0.8 59,197 - -1.6 59,198 + -1.7 59,198 + +1.2 59,198 + -1.6 59,198 + +0.8 59,199 - +0.3 59,199 - +1.1 59,357 + +0.6 59,560 + Ac3H11_382 0.18 +1.8 59,560 + Ac3H11_382 0.18 +1.0 59,561 - Ac3H11_382 0.18 +0.7 59,684 + Ac3H11_382 0.25 -0.0 59,684 + Ac3H11_382 0.25 -0.6 59,684 + Ac3H11_382 0.25 -0.9 59,684 + Ac3H11_382 0.25 -1.2 59,684 + Ac3H11_382 0.25 +1.6 59,684 + Ac3H11_382 0.25 +2.2 59,684 + Ac3H11_382 0.25 +0.8 59,685 - Ac3H11_382 0.25 +1.0 59,685 - Ac3H11_382 0.25 -1.0 59,685 - Ac3H11_382 0.25 -0.7 59,685 - Ac3H11_382 0.25 -1.3 59,685 - Ac3H11_382 0.25 -0.2 59,685 - Ac3H11_382 0.25 -0.3 59,685 - Ac3H11_382 0.25 +0.6 60,367 - Ac3H11_382 0.64 -1.8 60,554 + Ac3H11_382 0.75 +1.2 60,555 - Ac3H11_382 0.75 -1.0 60,564 + Ac3H11_382 0.75 +0.9 60,576 + Ac3H11_382 0.76 -0.8 60,576 + +1.6 60,576 + Ac3H11_382 0.76 -1.6 60,576 + Ac3H11_382 0.76 +1.0 60,576 + Ac3H11_382 0.76 +1.2 60,577 - Ac3H11_382 0.76 -1.7 60,687 + Ac3H11_382 0.82 +1.2 60,688 - Ac3H11_382 0.83 -0.1 60,868 + +1.1 60,868 + -0.4 60,869 - +0.7 60,869 - -1.5 60,869 - +1.3 60,869 - -0.4 60,879 + +1.0 60,879 + +1.8 60,879 + -1.0 60,880 - +1.3 60,880 - -2.4 60,880 - -3.1 61,298 + -0.9 61,298 + -0.7 61,299 - -0.0 61,299 - -0.8 61,382 + -2.0 61,382 + -0.7 61,382 + +0.5 61,382 + -0.6 61,382 + +0.6 61,382 + +0.4 61,382 + -1.3 61,382 + +0.3 61,382 + -2.3 61,382 + +2.3 61,383 - +0.1 61,383 - -1.3 61,383 - +0.2 61,383 - +1.2 61,383 - +0.5 61,451 + +2.5 61,451 + -1.5 61,451 + +0.6 61,451 + +0.6 61,451 + -2.9 61,451 + +1.1 61,451 + +2.2 61,451 + +0.5 61,451 + +1.9 61,451 + +0.3 61,451 + +0.6 61,451 + +1.1 61,451 + +0.2 61,452 - +2.6 61,452 - +0.1 61,452 - +0.1 61,452 - -0.8 61,452 - -0.2 61,452 - -1.4 61,452 - +0.3 61,452 - +0.2 61,452 - +0.5 61,452 - +0.6 61,452 - -0.0 61,452 - -2.8 61,452 - -0.6 61,452 - -0.8 61,581 - Ac3H11_383 0.15 +1.0
Or see this region's nucleotide sequence