Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3803 and Ac3H11_3804 are separated by 370 nucleotides Ac3H11_3804 and Ac3H11_3805 overlap by 4 nucleotides
Ac3H11_3803 - Formate dehydrogenase-O, major subunit (EC 1.2.1.2), at 13,486 to 16,455
_3803
Ac3H11_3804 - Putative formate dehydrogenase-specific chaperone, at 16,826 to 17,461
_3804
Ac3H11_3805 - Iron-sulfur cluster-binding protein, at 17,458 to 19,527
_3805
Position (kb)
16
17
18 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 15.887 kb on + strand, within Ac3H11_3803 at 15.887 kb on + strand, within Ac3H11_3803 at 15.887 kb on + strand, within Ac3H11_3803 at 15.888 kb on - strand, within Ac3H11_3803 at 15.888 kb on - strand, within Ac3H11_3803 at 15.888 kb on - strand, within Ac3H11_3803 at 15.888 kb on - strand, within Ac3H11_3803 at 15.926 kb on + strand, within Ac3H11_3803 at 15.926 kb on + strand, within Ac3H11_3803 at 15.927 kb on - strand, within Ac3H11_3803 at 15.927 kb on - strand, within Ac3H11_3803 at 15.927 kb on - strand, within Ac3H11_3803 at 15.927 kb on - strand, within Ac3H11_3803 at 15.927 kb on - strand, within Ac3H11_3803 at 16.013 kb on + strand, within Ac3H11_3803 at 16.013 kb on + strand, within Ac3H11_3803 at 16.013 kb on + strand, within Ac3H11_3803 at 16.013 kb on + strand, within Ac3H11_3803 at 16.013 kb on + strand, within Ac3H11_3803 at 16.013 kb on + strand, within Ac3H11_3803 at 16.014 kb on - strand, within Ac3H11_3803 at 16.014 kb on - strand, within Ac3H11_3803 at 16.014 kb on - strand, within Ac3H11_3803 at 16.014 kb on - strand, within Ac3H11_3803 at 16.014 kb on - strand, within Ac3H11_3803 at 16.053 kb on - strand, within Ac3H11_3803 at 16.203 kb on + strand at 16.203 kb on + strand at 16.203 kb on + strand at 16.203 kb on + strand at 16.204 kb on - strand at 16.204 kb on - strand at 16.204 kb on - strand at 16.488 kb on + strand at 16.488 kb on + strand at 16.488 kb on + strand at 16.489 kb on - strand at 16.489 kb on - strand at 16.489 kb on - strand at 16.489 kb on - strand at 16.489 kb on - strand at 16.489 kb on - strand at 16.491 kb on + strand at 16.491 kb on + strand at 16.491 kb on + strand at 16.491 kb on + strand at 16.492 kb on - strand at 16.492 kb on - strand at 16.519 kb on - strand at 16.580 kb on + strand at 16.580 kb on + strand at 16.580 kb on + strand at 16.580 kb on + strand at 16.580 kb on + strand at 16.580 kb on + strand at 16.580 kb on + strand at 16.580 kb on + strand at 16.580 kb on + strand at 16.580 kb on + strand at 16.581 kb on - strand at 16.581 kb on - strand at 16.581 kb on - strand at 16.581 kb on - strand at 16.581 kb on - strand at 16.581 kb on - strand at 16.581 kb on - strand at 16.581 kb on - strand at 16.581 kb on - strand at 16.581 kb on - strand at 16.581 kb on - strand at 16.581 kb on - strand at 16.704 kb on + strand at 16.704 kb on + strand at 16.705 kb on - strand at 16.720 kb on + strand at 16.720 kb on + strand at 16.721 kb on - strand at 16.721 kb on - strand at 16.721 kb on - strand at 16.727 kb on + strand at 16.727 kb on + strand at 16.727 kb on + strand at 16.727 kb on + strand at 16.727 kb on + strand at 16.728 kb on - strand at 16.728 kb on - strand at 16.739 kb on + strand at 16.739 kb on + strand at 16.773 kb on - strand at 16.790 kb on + strand at 16.827 kb on + strand at 16.896 kb on + strand, within Ac3H11_3804 at 16.896 kb on + strand, within Ac3H11_3804 at 16.896 kb on + strand, within Ac3H11_3804 at 16.896 kb on + strand, within Ac3H11_3804 at 16.896 kb on + strand, within Ac3H11_3804 at 16.896 kb on + strand, within Ac3H11_3804 at 16.896 kb on + strand, within Ac3H11_3804 at 16.896 kb on + strand, within Ac3H11_3804 at 16.897 kb on - strand, within Ac3H11_3804 at 16.897 kb on - strand, within Ac3H11_3804 at 16.897 kb on - strand, within Ac3H11_3804 at 16.897 kb on - strand, within Ac3H11_3804 at 17.025 kb on + strand, within Ac3H11_3804 at 17.025 kb on + strand, within Ac3H11_3804 at 17.025 kb on + strand, within Ac3H11_3804 at 17.025 kb on + strand, within Ac3H11_3804 at 17.026 kb on - strand, within Ac3H11_3804 at 17.046 kb on + strand, within Ac3H11_3804 at 17.046 kb on + strand, within Ac3H11_3804 at 17.046 kb on + strand, within Ac3H11_3804 at 17.046 kb on + strand, within Ac3H11_3804 at 17.157 kb on + strand, within Ac3H11_3804 at 17.157 kb on + strand, within Ac3H11_3804 at 17.169 kb on + strand, within Ac3H11_3804 at 17.358 kb on + strand, within Ac3H11_3804 at 17.358 kb on + strand, within Ac3H11_3804 at 17.358 kb on + strand, within Ac3H11_3804 at 17.358 kb on + strand, within Ac3H11_3804 at 17.358 kb on + strand, within Ac3H11_3804 at 17.358 kb on + strand, within Ac3H11_3804 at 17.359 kb on - strand, within Ac3H11_3804 at 17.359 kb on - strand, within Ac3H11_3804 at 17.359 kb on - strand, within Ac3H11_3804 at 17.361 kb on + strand, within Ac3H11_3804 at 17.361 kb on + strand, within Ac3H11_3804 at 17.361 kb on + strand, within Ac3H11_3804 at 17.362 kb on - strand, within Ac3H11_3804 at 17.362 kb on - strand, within Ac3H11_3804 at 17.362 kb on - strand, within Ac3H11_3804 at 17.362 kb on - strand, within Ac3H11_3804 at 17.362 kb on - strand, within Ac3H11_3804 at 17.362 kb on - strand, within Ac3H11_3804 at 17.362 kb on - strand, within Ac3H11_3804 at 17.382 kb on + strand, within Ac3H11_3804 at 17.382 kb on + strand, within Ac3H11_3804 at 17.382 kb on + strand, within Ac3H11_3804 at 17.382 kb on + strand, within Ac3H11_3804 at 17.382 kb on + strand, within Ac3H11_3804 at 17.383 kb on - strand, within Ac3H11_3804 at 17.383 kb on - strand, within Ac3H11_3804 at 17.383 kb on - strand, within Ac3H11_3804 at 17.495 kb on + strand at 17.495 kb on + strand at 17.496 kb on - strand at 18.113 kb on + strand, within Ac3H11_3805 at 18.173 kb on + strand, within Ac3H11_3805 at 18.173 kb on + strand, within Ac3H11_3805 at 18.173 kb on + strand, within Ac3H11_3805 at 18.173 kb on + strand, within Ac3H11_3805 at 18.174 kb on - strand, within Ac3H11_3805 at 18.225 kb on - strand, within Ac3H11_3805 at 18.225 kb on - strand, within Ac3H11_3805 at 18.386 kb on - strand, within Ac3H11_3805 at 18.386 kb on - strand, within Ac3H11_3805 at 18.413 kb on + strand, within Ac3H11_3805 at 18.413 kb on + strand, within Ac3H11_3805 at 18.413 kb on + strand, within Ac3H11_3805 at 18.413 kb on + strand, within Ac3H11_3805 at 18.413 kb on + strand, within Ac3H11_3805 at 18.414 kb on - strand, within Ac3H11_3805 at 18.414 kb on - strand, within Ac3H11_3805 at 18.414 kb on - strand, within Ac3H11_3805
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 15,887 + Ac3H11_3803 0.81 -0.6 15,887 + Ac3H11_3803 0.81 -2.7 15,887 + Ac3H11_3803 0.81 -2.1 15,888 - Ac3H11_3803 0.81 +1.2 15,888 - Ac3H11_3803 0.81 +0.2 15,888 - Ac3H11_3803 0.81 +2.4 15,888 - Ac3H11_3803 0.81 +0.4 15,926 + Ac3H11_3803 0.82 +0.4 15,926 + Ac3H11_3803 0.82 -0.2 15,927 - Ac3H11_3803 0.82 +1.6 15,927 - Ac3H11_3803 0.82 +1.9 15,927 - Ac3H11_3803 0.82 +0.1 15,927 - Ac3H11_3803 0.82 -1.4 15,927 - Ac3H11_3803 0.82 +0.2 16,013 + Ac3H11_3803 0.85 +0.5 16,013 + Ac3H11_3803 0.85 -0.8 16,013 + Ac3H11_3803 0.85 +1.2 16,013 + Ac3H11_3803 0.85 -1.3 16,013 + Ac3H11_3803 0.85 +0.2 16,013 + Ac3H11_3803 0.85 -0.2 16,014 - Ac3H11_3803 0.85 -1.1 16,014 - Ac3H11_3803 0.85 +0.4 16,014 - Ac3H11_3803 0.85 -0.1 16,014 - Ac3H11_3803 0.85 +0.6 16,014 - Ac3H11_3803 0.85 -0.8 16,053 - Ac3H11_3803 0.86 -0.3 16,203 + +0.8 16,203 + -2.4 16,203 + -1.3 16,203 + -0.1 16,204 - +0.7 16,204 - +0.8 16,204 - -1.4 16,488 + +0.6 16,488 + +0.5 16,488 + +1.1 16,489 - -0.0 16,489 - +0.8 16,489 - +0.7 16,489 - -0.0 16,489 - -0.4 16,489 - +1.8 16,491 + -1.6 16,491 + +0.8 16,491 + +1.6 16,491 + -3.4 16,492 - +0.0 16,492 - +1.2 16,519 - +2.0 16,580 + -0.2 16,580 + +0.4 16,580 + -2.3 16,580 + -0.9 16,580 + +0.5 16,580 + -2.4 16,580 + -1.4 16,580 + +0.1 16,580 + +1.8 16,580 + -3.6 16,581 - +0.8 16,581 - +0.7 16,581 - -0.5 16,581 - -0.2 16,581 - -2.8 16,581 - -3.0 16,581 - +1.6 16,581 - -1.6 16,581 - -0.1 16,581 - -0.2 16,581 - +0.5 16,581 - +1.1 16,704 + -1.9 16,704 + +0.6 16,705 - -0.7 16,720 + -2.7 16,720 + +0.3 16,721 - -0.2 16,721 - +0.2 16,721 - -2.4 16,727 + -0.8 16,727 + -1.0 16,727 + -2.1 16,727 + -1.2 16,727 + -3.2 16,728 - -1.4 16,728 - +1.2 16,739 + +0.2 16,739 + +0.7 16,773 - +0.6 16,790 + -2.1 16,827 + -1.4 16,896 + Ac3H11_3804 0.11 -0.7 16,896 + Ac3H11_3804 0.11 -3.5 16,896 + Ac3H11_3804 0.11 -1.2 16,896 + Ac3H11_3804 0.11 +0.4 16,896 + Ac3H11_3804 0.11 +1.3 16,896 + Ac3H11_3804 0.11 -1.5 16,896 + Ac3H11_3804 0.11 +1.8 16,896 + Ac3H11_3804 0.11 -0.0 16,897 - Ac3H11_3804 0.11 +3.0 16,897 - Ac3H11_3804 0.11 -3.4 16,897 - Ac3H11_3804 0.11 -2.7 16,897 - Ac3H11_3804 0.11 +0.6 17,025 + Ac3H11_3804 0.31 -1.6 17,025 + Ac3H11_3804 0.31 +0.1 17,025 + Ac3H11_3804 0.31 -1.0 17,025 + Ac3H11_3804 0.31 +1.3 17,026 - Ac3H11_3804 0.31 -1.2 17,046 + Ac3H11_3804 0.35 -1.7 17,046 + Ac3H11_3804 0.35 -1.0 17,046 + Ac3H11_3804 0.35 +0.6 17,046 + Ac3H11_3804 0.35 +0.7 17,157 + Ac3H11_3804 0.52 -0.7 17,157 + Ac3H11_3804 0.52 -2.5 17,169 + Ac3H11_3804 0.54 +0.6 17,358 + Ac3H11_3804 0.84 +1.8 17,358 + Ac3H11_3804 0.84 -1.4 17,358 + Ac3H11_3804 0.84 +0.1 17,358 + Ac3H11_3804 0.84 +0.0 17,358 + Ac3H11_3804 0.84 -0.8 17,358 + Ac3H11_3804 0.84 -0.5 17,359 - Ac3H11_3804 0.84 +2.1 17,359 - Ac3H11_3804 0.84 +0.1 17,359 - Ac3H11_3804 0.84 +0.9 17,361 + Ac3H11_3804 0.84 +1.6 17,361 + Ac3H11_3804 0.84 -2.6 17,361 + Ac3H11_3804 0.84 -1.3 17,362 - Ac3H11_3804 0.84 -1.0 17,362 - Ac3H11_3804 0.84 -1.9 17,362 - Ac3H11_3804 0.84 -0.4 17,362 - Ac3H11_3804 0.84 +0.3 17,362 - Ac3H11_3804 0.84 -3.0 17,362 - Ac3H11_3804 0.84 +0.8 17,362 - Ac3H11_3804 0.84 +0.5 17,382 + Ac3H11_3804 0.87 -0.4 17,382 + Ac3H11_3804 0.87 -0.1 17,382 + Ac3H11_3804 0.87 +0.4 17,382 + Ac3H11_3804 0.87 -0.3 17,382 + Ac3H11_3804 0.87 -1.3 17,383 - Ac3H11_3804 0.88 -0.6 17,383 - Ac3H11_3804 0.88 -0.6 17,383 - Ac3H11_3804 0.88 +1.0 17,495 + +0.1 17,495 + -1.0 17,496 - -1.6 18,113 + Ac3H11_3805 0.32 -2.8 18,173 + Ac3H11_3805 0.35 -0.0 18,173 + Ac3H11_3805 0.35 +0.1 18,173 + Ac3H11_3805 0.35 +1.1 18,173 + Ac3H11_3805 0.35 -2.8 18,174 - Ac3H11_3805 0.35 -1.7 18,225 - Ac3H11_3805 0.37 -0.1 18,225 - Ac3H11_3805 0.37 +0.6 18,386 - Ac3H11_3805 0.45 -1.5 18,386 - Ac3H11_3805 0.45 -2.0 18,413 + Ac3H11_3805 0.46 -2.1 18,413 + Ac3H11_3805 0.46 -2.0 18,413 + Ac3H11_3805 0.46 -1.6 18,413 + Ac3H11_3805 0.46 -0.3 18,413 + Ac3H11_3805 0.46 -0.1 18,414 - Ac3H11_3805 0.46 +0.1 18,414 - Ac3H11_3805 0.46 +0.9 18,414 - Ac3H11_3805 0.46 -1.6
Or see this region's nucleotide sequence