Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3704 and Ac3H11_3705 overlap by 4 nucleotides
Ac3H11_3704 - Urea ABC transporter, permease protein UrtC, at 63,564 to 64,703
_3704
Ac3H11_3705 - Urea ABC transporter, ATPase protein UrtD, at 64,700 to 65,575
_3705
Position (kb) 64
65
66 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 63.727 kb on - strand, within Ac3H11_3704 at 63.759 kb on + strand, within Ac3H11_3704 at 63.760 kb on - strand, within Ac3H11_3704 at 63.760 kb on - strand, within Ac3H11_3704 at 63.799 kb on - strand, within Ac3H11_3704 at 63.799 kb on - strand, within Ac3H11_3704 at 63.849 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand at 63.864 kb on + strand, within Ac3H11_3704 at 63.865 kb on - strand, within Ac3H11_3704 at 63.865 kb on - strand, within Ac3H11_3704 at 63.897 kb on + strand, within Ac3H11_3704 at 63.898 kb on - strand, within Ac3H11_3704 at 63.898 kb on - strand, within Ac3H11_3704 at 64.068 kb on + strand, within Ac3H11_3704 at 64.069 kb on - strand, within Ac3H11_3704 at 64.069 kb on - strand, within Ac3H11_3704 at 64.341 kb on + strand, within Ac3H11_3704 at 64.357 kb on - strand, within Ac3H11_3704 at 64.357 kb on - strand, within Ac3H11_3704 at 64.413 kb on + strand, within Ac3H11_3704 at 64.413 kb on + strand, within Ac3H11_3704 at 64.413 kb on + strand, within Ac3H11_3704 at 64.413 kb on + strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.590 kb on + strand at 64.591 kb on - strand at 65.561 kb on + strand at 65.561 kb on + strand at 65.562 kb on - strand at 65.562 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 63,727 - Ac3H11_3704 0.14 -0.6 63,759 + Ac3H11_3704 0.17 -1.0 63,760 - Ac3H11_3704 0.17 -0.0 63,760 - Ac3H11_3704 0.17 -1.9 63,799 - Ac3H11_3704 0.21 +0.1 63,799 - Ac3H11_3704 0.21 -1.2 63,849 + Ac3H11_3704 0.25 -1.5 63,864 + Ac3H11_3704 0.26 +1.6 63,864 + Ac3H11_3704 0.26 -2.4 63,864 + Ac3H11_3704 0.26 -1.9 63,864 + Ac3H11_3704 0.26 -3.0 63,864 + Ac3H11_3704 0.26 -0.3 63,864 + +2.6 63,864 + Ac3H11_3704 0.26 +0.4 63,865 - Ac3H11_3704 0.26 -0.5 63,865 - Ac3H11_3704 0.26 -0.1 63,897 + Ac3H11_3704 0.29 -0.1 63,898 - Ac3H11_3704 0.29 -1.7 63,898 - Ac3H11_3704 0.29 +0.3 64,068 + Ac3H11_3704 0.44 +0.4 64,069 - Ac3H11_3704 0.44 -1.2 64,069 - Ac3H11_3704 0.44 -0.2 64,341 + Ac3H11_3704 0.68 +0.2 64,357 - Ac3H11_3704 0.70 +0.4 64,357 - Ac3H11_3704 0.70 -1.1 64,413 + Ac3H11_3704 0.74 +1.6 64,413 + Ac3H11_3704 0.74 -0.4 64,413 + Ac3H11_3704 0.74 +1.4 64,413 + Ac3H11_3704 0.74 +1.3 64,414 - Ac3H11_3704 0.75 -1.0 64,414 - Ac3H11_3704 0.75 -0.0 64,414 - Ac3H11_3704 0.75 -0.2 64,414 - Ac3H11_3704 0.75 -0.2 64,414 - Ac3H11_3704 0.75 -1.6 64,414 - Ac3H11_3704 0.75 -0.4 64,590 + -0.7 64,591 - -4.0 65,561 + -2.7 65,561 + +0.8 65,562 - +0.1 65,562 - +1.8
Or see this region's nucleotide sequence