Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3575 and Ac3H11_3576 are separated by 15 nucleotides Ac3H11_3576 and Ac3H11_3577 overlap by 4 nucleotides Ac3H11_3577 and Ac3H11_3578 overlap by 4 nucleotides
Ac3H11_3575 - Ubiquinone biosynthesis monooxygenase UbiB, at 129,680 to 131,380
_3575
Ac3H11_3576 - integral membrane protein-like protein, at 131,396 to 131,872
_3576
Ac3H11_3577 - hypothetical protein, at 131,869 to 132,255
_3577
Ac3H11_3578 - Carboxynorspermidine dehydrogenase, at 132,252 to 133,379
_3578
Position (kb) 131
132 Strain fitness (log2 ratio) -2
-1
0
1
2 at 130.473 kb on + strand, within Ac3H11_3575 at 130.473 kb on + strand, within Ac3H11_3575 at 130.473 kb on + strand, within Ac3H11_3575 at 130.474 kb on - strand, within Ac3H11_3575 at 131.392 kb on - strand at 131.392 kb on - strand at 131.392 kb on - strand at 131.430 kb on + strand at 131.431 kb on - strand at 131.431 kb on - strand at 131.431 kb on - strand at 131.604 kb on + strand, within Ac3H11_3576 at 131.689 kb on + strand, within Ac3H11_3576 at 131.689 kb on + strand, within Ac3H11_3576 at 131.790 kb on + strand, within Ac3H11_3576 at 131.790 kb on + strand, within Ac3H11_3576 at 131.790 kb on + strand, within Ac3H11_3576 at 131.791 kb on - strand, within Ac3H11_3576 at 131.862 kb on + strand at 131.862 kb on + strand at 131.863 kb on - strand at 132.026 kb on + strand, within Ac3H11_3577 at 132.026 kb on + strand, within Ac3H11_3577 at 132.027 kb on - strand, within Ac3H11_3577 at 132.754 kb on - strand, within Ac3H11_3578 at 132.830 kb on - strand, within Ac3H11_3578 at 132.830 kb on - strand, within Ac3H11_3578
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 130,473 + Ac3H11_3575 0.47 -2.7 130,473 + Ac3H11_3575 0.47 +0.3 130,473 + Ac3H11_3575 0.47 +0.6 130,474 - Ac3H11_3575 0.47 +0.1 131,392 - +1.5 131,392 - +1.5 131,392 - -1.5 131,430 + +1.4 131,431 - +1.5 131,431 - -0.8 131,431 - +1.0 131,604 + Ac3H11_3576 0.44 -2.1 131,689 + Ac3H11_3576 0.61 -1.6 131,689 + Ac3H11_3576 0.61 +1.1 131,790 + Ac3H11_3576 0.83 +0.1 131,790 + Ac3H11_3576 0.83 -0.1 131,790 + Ac3H11_3576 0.83 +2.5 131,791 - Ac3H11_3576 0.83 -0.8 131,862 + +0.6 131,862 + -0.4 131,863 - +0.6 132,026 + Ac3H11_3577 0.41 -2.2 132,026 + Ac3H11_3577 0.41 +0.4 132,027 - Ac3H11_3577 0.41 -0.8 132,754 - Ac3H11_3578 0.45 +0.2 132,830 - Ac3H11_3578 0.51 +0.4 132,830 - Ac3H11_3578 0.51 -0.6
Or see this region's nucleotide sequence