Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2781

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,084,849	+				-0.2
1,084,849	+				-0.8
1,084,849	+				+1.3
1,084,849	+				-0.2
1,084,850	-				-1.4
1,084,850	-				-1.9
1,084,850	-				-0.2
1,084,973	+				-0.6
1,085,001	+				+0.9
1,085,001	+				+1.6
1,085,001	+				-0.8
1,085,002	-				+0.2
1,085,002	-				-0.2
1,085,007	+				-0.1
1,085,008	-				+0.2
1,085,180	+				+0.8
1,085,180	+				+0.7
1,085,181	-				+0.2
1,085,181	-				+0.2
1,085,425	+				-2.4
1,085,425	+				-0.7
1,085,426	-				-1.0
1,085,426	-				-0.5
1,085,594	+				+2.3
1,085,595	-				-1.1
1,085,595	-				-1.4
1,085,981	+		Ac3H11_2781	0.30	-0.4
1,086,043	+		Ac3H11_2781	0.36	+1.2
1,086,043	+		Ac3H11_2781	0.36	+1.0
1,086,044	-		Ac3H11_2781	0.36	-1.3
1,086,044	-		Ac3H11_2781	0.36	+1.2
1,086,071	+		Ac3H11_2781	0.39	+0.1
1,086,101	+		Ac3H11_2781	0.42	+0.9
1,086,101	+		Ac3H11_2781	0.42	+0.8
1,086,101	+		Ac3H11_2781	0.42	+1.0
1,086,101	+		Ac3H11_2781	0.42	-2.6
1,086,101	+		Ac3H11_2781	0.42	+1.0
1,086,101	+		Ac3H11_2781	0.42	+0.7
1,086,101	+		Ac3H11_2781	0.42	-0.9
1,086,101	+		Ac3H11_2781	0.42	-0.1
1,086,102	-		Ac3H11_2781	0.42	-0.1
1,086,102	-		Ac3H11_2781	0.42	+0.9
1,086,102	-		Ac3H11_2781	0.42	+0.1
1,086,102	-		Ac3H11_2781	0.42	-1.6
1,086,102	-		Ac3H11_2781	0.42	-0.0
1,086,102	-		Ac3H11_2781	0.42	-0.0
1,086,102	-		Ac3H11_2781	0.42	+0.7
1,086,102	-		Ac3H11_2781	0.42	+1.0
1,086,102	-		Ac3H11_2781	0.42	-2.1
1,086,102	-		Ac3H11_2781	0.42	+0.9
1,086,102	-		Ac3H11_2781	0.42	+0.2
1,086,102	-		Ac3H11_2781	0.42	+0.8
1,086,102	-		Ac3H11_2781	0.42	-0.4
1,086,103	+		Ac3H11_2781	0.42	-0.2
1,086,103	+		Ac3H11_2781	0.42	-0.2
1,086,103	+		Ac3H11_2781	0.42	-0.1
1,086,103	+		Ac3H11_2781	0.42	-0.1
1,086,104	-		Ac3H11_2781	0.42	-1.3
1,086,126	-		Ac3H11_2781	0.45	-0.0
1,086,190	+		Ac3H11_2781	0.51	-0.7
1,086,190	+		Ac3H11_2781	0.51	-2.2
1,086,190	+		Ac3H11_2781	0.51	+0.5
1,086,190	+		Ac3H11_2781	0.51	-0.3
1,086,191	-		Ac3H11_2781	0.51	+0.6
1,086,191	-		Ac3H11_2781	0.51	+0.0
1,086,191	-		Ac3H11_2781	0.51	-1.7
1,086,220	+		Ac3H11_2781	0.54	-1.4
1,086,220	+		Ac3H11_2781	0.54	+0.4
1,086,221	-		Ac3H11_2781	0.54	-2.9
1,086,344	-		Ac3H11_2781	0.66	-2.4
1,086,394	+		Ac3H11_2781	0.71	-1.3
1,086,394	+		Ac3H11_2781	0.71	-1.4
1,086,395	-		Ac3H11_2781	0.72	-2.1
1,086,395	-		Ac3H11_2781	0.72	+2.2
1,086,443	+		Ac3H11_2781	0.76	-0.5
1,086,443	+		Ac3H11_2781	0.76	-0.6
1,086,561	+		Ac3H11_2781	0.88	-2.1
1,086,578	-				-1.9
1,086,667	+				+0.6
1,086,668	-				+0.7
1,086,668	-				-1.9
1,086,701	-				+0.9
1,086,703	+				-0.5
1,086,704	-				-1.1
1,086,704	-				-2.5
1,086,704	-				-0.8
1,086,785	-				-0.4
1,086,785	-				+0.8
1,086,968	-		Ac3H11_2782	0.24	+0.1
1,086,987	+		Ac3H11_2782	0.25	-0.6
1,086,988	-		Ac3H11_2782	0.25	-1.2
1,087,002	-		Ac3H11_2782	0.27	+0.4
1,087,006	-		Ac3H11_2782	0.27	+0.4
1,087,006	-				-1.1
1,087,006	-		Ac3H11_2782	0.27	+0.4
1,087,052	+		Ac3H11_2782	0.31	-3.8
1,087,053	-		Ac3H11_2782	0.31	+1.1
1,087,171	+		Ac3H11_2782	0.42	-1.3
1,087,172	-		Ac3H11_2782	0.42	-0.3
1,087,172	-		Ac3H11_2782	0.42	+0.5
1,087,172	-		Ac3H11_2782	0.42	-0.1
1,087,172	-		Ac3H11_2782	0.42	-3.5
1,087,198	+		Ac3H11_2782	0.44	-2.1
1,087,199	-		Ac3H11_2782	0.44	+0.5
1,087,199	-		Ac3H11_2782	0.44	-0.3
1,087,201	+		Ac3H11_2782	0.44	-0.1
1,087,201	+		Ac3H11_2782	0.44	-0.1
1,087,313	-		Ac3H11_2782	0.54	-2.0
1,087,322	-		Ac3H11_2782	0.55	+1.3
1,087,322	-		Ac3H11_2782	0.55	+1.2
1,087,322	-		Ac3H11_2782	0.55	+1.2
1,087,397	-		Ac3H11_2782	0.61	-1.6
1,087,426	+		Ac3H11_2782	0.64	-0.1
1,087,426	+		Ac3H11_2782	0.64	-0.7
1,087,426	+		Ac3H11_2782	0.64	+0.0
1,087,426	+		Ac3H11_2782	0.64	+0.5
1,087,426	+		Ac3H11_2782	0.64	-1.8
1,087,427	-		Ac3H11_2782	0.64	-1.9
1,087,427	-		Ac3H11_2782	0.64	-0.5
1,087,427	-		Ac3H11_2782	0.64	-1.4
1,087,427	-		Ac3H11_2782	0.64	-1.3
1,087,427	-		Ac3H11_2782	0.64	+0.3
1,087,480	+		Ac3H11_2782	0.69	+1.7
1,087,481	-		Ac3H11_2782	0.69	-0.4
1,087,675	+		Ac3H11_2782	0.86	+1.3