Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2737 and Ac3H11_2738 are separated by 4 nucleotides Ac3H11_2738 and Ac3H11_2739 overlap by 4 nucleotides Ac3H11_2739 and Ac3H11_2740 overlap by 4 nucleotides
Ac3H11_2737 - putative inner membrane efflux protein, at 1,036,967 to 1,038,145
_2737
Ac3H11_2738 - Glutathione peroxidase family protein, at 1,038,150 to 1,038,698
_2738
Ac3H11_2739 - FIG00481831: hypothetical protein, at 1,038,695 to 1,039,228
_2739
Ac3H11_2740 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 1,039,225 to 1,040,109
_2740
Position (kb) 1038
1039 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1037.219 kb on + strand, within Ac3H11_2737 at 1037.219 kb on + strand, within Ac3H11_2737 at 1037.220 kb on - strand, within Ac3H11_2737 at 1037.220 kb on - strand, within Ac3H11_2737 at 1037.268 kb on + strand, within Ac3H11_2737 at 1037.382 kb on + strand, within Ac3H11_2737 at 1037.382 kb on + strand, within Ac3H11_2737 at 1037.383 kb on - strand, within Ac3H11_2737 at 1037.549 kb on - strand, within Ac3H11_2737 at 1038.377 kb on - strand, within Ac3H11_2738 at 1038.571 kb on + strand, within Ac3H11_2738 at 1038.704 kb on + strand at 1038.705 kb on - strand at 1038.715 kb on - strand at 1038.868 kb on - strand, within Ac3H11_2739 at 1039.289 kb on + strand at 1039.289 kb on + strand at 1039.290 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,037,219 + Ac3H11_2737 0.21 -2.4 1,037,219 + Ac3H11_2737 0.21 -1.5 1,037,220 - Ac3H11_2737 0.21 +1.1 1,037,220 - Ac3H11_2737 0.21 -2.5 1,037,268 + Ac3H11_2737 0.26 +1.6 1,037,382 + Ac3H11_2737 0.35 -0.5 1,037,382 + Ac3H11_2737 0.35 -2.1 1,037,383 - Ac3H11_2737 0.35 +0.2 1,037,549 - Ac3H11_2737 0.49 -2.0 1,038,377 - Ac3H11_2738 0.41 +0.0 1,038,571 + Ac3H11_2738 0.77 -2.9 1,038,704 + +0.9 1,038,705 - -0.5 1,038,715 - -1.0 1,038,868 - Ac3H11_2739 0.32 -0.7 1,039,289 + -0.2 1,039,289 + +0.5 1,039,290 - +0.5
Or see this region's nucleotide sequence