Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2387 and Ac3H11_2388 are separated by 210 nucleotides Ac3H11_2388 and Ac3H11_2389 are separated by 181 nucleotides Ac3H11_2389 and Ac3H11_2390 are separated by 35 nucleotides
Ac3H11_2387 - 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38), at 646,231 to 647,049
_2387
Ac3H11_2388 - Adenylate kinase (EC 2.7.4.3), at 647,260 to 647,916
_2388
Ac3H11_2389 - hypothetical protein, at 648,098 to 648,568
_2389
Ac3H11_2390 - putative membrane protein, at 648,604 to 649,023
_2390
Position (kb)
647
648 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 647.110 kb on + strand at 647.110 kb on + strand at 647.110 kb on + strand at 647.110 kb on + strand at 647.110 kb on + strand at 647.110 kb on + strand at 647.110 kb on + strand at 647.111 kb on - strand at 647.111 kb on - strand at 647.111 kb on - strand at 647.111 kb on - strand at 647.111 kb on - strand at 647.122 kb on + strand at 647.122 kb on + strand at 647.122 kb on + strand at 647.122 kb on + strand at 647.122 kb on + strand at 647.122 kb on + strand at 647.122 kb on + strand at 647.122 kb on + strand at 647.123 kb on - strand at 647.123 kb on - strand at 647.123 kb on - strand at 647.123 kb on - strand at 647.123 kb on - strand at 647.148 kb on + strand at 647.148 kb on + strand at 647.148 kb on + strand at 647.149 kb on - strand at 647.196 kb on + strand at 647.242 kb on + strand at 647.928 kb on - strand at 647.939 kb on + strand at 647.939 kb on + strand at 647.970 kb on - strand at 648.009 kb on + strand at 648.073 kb on + strand at 648.073 kb on + strand at 648.074 kb on - strand at 648.074 kb on - strand at 648.074 kb on - strand at 648.075 kb on + strand at 648.123 kb on + strand at 648.123 kb on + strand at 648.123 kb on + strand at 648.124 kb on - strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.147 kb on + strand, within Ac3H11_2389 at 648.147 kb on + strand, within Ac3H11_2389 at 648.147 kb on + strand, within Ac3H11_2389 at 648.147 kb on + strand, within Ac3H11_2389 at 648.148 kb on - strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.466 kb on - strand, within Ac3H11_2389 at 648.568 kb on + strand at 648.568 kb on + strand at 648.568 kb on + strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.606 kb on - strand at 648.606 kb on - strand at 648.611 kb on + strand at 648.612 kb on - strand at 648.612 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 647,110 + -0.3 647,110 + -1.6 647,110 + -3.6 647,110 + +0.2 647,110 + -1.9 647,110 + +0.0 647,110 + -0.8 647,111 - -0.2 647,111 - -0.6 647,111 - -1.8 647,111 - -1.2 647,111 - +1.4 647,122 + -1.1 647,122 + -0.1 647,122 + +0.0 647,122 + +1.1 647,122 + +0.3 647,122 + +1.1 647,122 + -0.9 647,122 + +0.2 647,123 - +0.6 647,123 - -1.4 647,123 - -1.6 647,123 - -0.3 647,123 - +2.4 647,148 + +0.3 647,148 + +0.9 647,148 + -2.2 647,149 - +0.1 647,196 + -1.0 647,242 + -0.1 647,928 - -0.3 647,939 + +1.7 647,939 + +1.3 647,970 - -1.4 648,009 + -2.4 648,073 + -0.7 648,073 + +0.5 648,074 - -1.4 648,074 - +1.1 648,074 - -1.3 648,075 + -1.5 648,123 + +2.1 648,123 + +0.5 648,123 + -0.6 648,124 - -0.4 648,141 + -2.0 648,141 + -0.3 648,141 + -1.6 648,141 + +0.0 648,141 + -0.5 648,141 + -0.4 648,141 + +1.9 648,141 + +2.8 648,141 + +1.1 648,141 + -1.7 648,141 + -2.5 648,141 + -0.2 648,141 + -0.5 648,141 + -1.3 648,141 + +0.4 648,141 + -1.1 648,142 - +1.7 648,142 - +0.2 648,142 - +0.5 648,142 - -2.1 648,142 - -0.6 648,142 - +0.9 648,142 - -1.5 648,142 - +0.8 648,142 - +0.0 648,142 - +0.1 648,142 - -0.3 648,142 - -1.1 648,142 - -0.7 648,142 - -3.5 648,147 + Ac3H11_2389 0.10 +0.3 648,147 + Ac3H11_2389 0.10 +0.7 648,147 + Ac3H11_2389 0.10 +0.3 648,147 + Ac3H11_2389 0.10 -0.1 648,148 - Ac3H11_2389 0.11 -0.3 648,465 + Ac3H11_2389 0.78 +0.1 648,465 + Ac3H11_2389 0.78 +1.2 648,465 + Ac3H11_2389 0.78 -1.5 648,465 + Ac3H11_2389 0.78 +0.2 648,465 + Ac3H11_2389 0.78 +0.5 648,465 + Ac3H11_2389 0.78 -0.5 648,465 + Ac3H11_2389 0.78 -0.7 648,465 + Ac3H11_2389 0.78 -0.1 648,466 - Ac3H11_2389 0.78 +0.8 648,568 + -0.1 648,568 + -0.3 648,568 + -1.8 648,569 - -2.5 648,569 - +0.2 648,569 - +0.4 648,569 - +1.8 648,569 - -0.7 648,606 - -1.3 648,606 - +0.6 648,611 + -0.1 648,612 - -0.1 648,612 - +0.8
Or see this region's nucleotide sequence