Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2226 and Ac3H11_2227 overlap by 4 nucleotides Ac3H11_2227 and Ac3H11_2228 overlap by 4 nucleotides
Ac3H11_2226 - Zinc uptake regulation protein ZUR, at 463,324 to 463,749
_2226
Ac3H11_2227 - Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1), at 463,746 to 464,429
_2227
Ac3H11_2228 - ABC-type antimicrobial peptide transport system, permease component, at 464,426 to 465,661
_2228
Position (kb) 463
464
465 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 462.830 kb on + strand at 462.830 kb on + strand at 462.830 kb on + strand at 462.830 kb on + strand at 462.831 kb on - strand at 462.831 kb on - strand at 462.831 kb on - strand at 462.846 kb on + strand at 462.881 kb on + strand at 462.881 kb on + strand at 462.882 kb on - strand at 462.882 kb on - strand at 462.924 kb on - strand at 462.924 kb on - strand at 462.981 kb on + strand at 462.981 kb on + strand at 462.982 kb on - strand at 462.985 kb on + strand at 462.986 kb on - strand at 462.989 kb on - strand at 462.991 kb on + strand at 463.074 kb on + strand at 463.074 kb on + strand at 463.074 kb on + strand at 463.074 kb on + strand at 463.074 kb on + strand at 463.075 kb on - strand at 463.075 kb on - strand at 463.075 kb on - strand at 463.075 kb on - strand at 463.075 kb on - strand at 463.077 kb on + strand at 463.077 kb on + strand at 463.078 kb on - strand at 463.078 kb on - strand at 463.193 kb on + strand at 463.193 kb on + strand at 463.193 kb on + strand at 463.194 kb on - strand at 463.194 kb on - strand at 463.226 kb on + strand at 463.226 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.272 kb on - strand at 463.272 kb on - strand at 463.272 kb on - strand at 463.272 kb on - strand at 463.272 kb on - strand at 463.272 kb on - strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.364 kb on - strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.771 kb on - strand at 463.771 kb on - strand at 463.771 kb on - strand at 463.771 kb on - strand at 463.771 kb on - strand at 463.771 kb on - strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.776 kb on + strand at 463.776 kb on + strand at 463.776 kb on + strand at 463.776 kb on + strand at 463.777 kb on - strand at 463.777 kb on - strand at 464.016 kb on + strand, within Ac3H11_2227 at 464.016 kb on + strand, within Ac3H11_2227 at 464.017 kb on - strand, within Ac3H11_2227 at 464.017 kb on - strand, within Ac3H11_2227 at 464.017 kb on - strand, within Ac3H11_2227 at 464.017 kb on - strand, within Ac3H11_2227 at 464.017 kb on - strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.062 kb on - strand, within Ac3H11_2227 at 464.096 kb on + strand, within Ac3H11_2227 at 464.097 kb on - strand, within Ac3H11_2227 at 464.097 kb on - strand, within Ac3H11_2227 at 464.390 kb on - strand at 464.465 kb on + strand at 464.466 kb on - strand at 464.756 kb on + strand, within Ac3H11_2228 at 464.756 kb on + strand, within Ac3H11_2228 at 464.756 kb on + strand, within Ac3H11_2228 at 464.756 kb on + strand, within Ac3H11_2228 at 464.756 kb on + strand, within Ac3H11_2228 at 464.756 kb on + strand, within Ac3H11_2228 at 464.757 kb on - strand, within Ac3H11_2228 at 464.757 kb on - strand, within Ac3H11_2228 at 464.757 kb on - strand, within Ac3H11_2228 at 464.792 kb on + strand, within Ac3H11_2228 at 464.792 kb on + strand, within Ac3H11_2228 at 464.792 kb on + strand, within Ac3H11_2228 at 464.793 kb on - strand, within Ac3H11_2228 at 464.793 kb on - strand, within Ac3H11_2228 at 464.793 kb on - strand, within Ac3H11_2228 at 464.793 kb on - strand, within Ac3H11_2228 at 464.793 kb on - strand, within Ac3H11_2228 at 464.804 kb on + strand, within Ac3H11_2228 at 464.805 kb on - strand, within Ac3H11_2228 at 464.805 kb on - strand, within Ac3H11_2228 at 464.981 kb on + strand, within Ac3H11_2228
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 462,830 + +1.6 462,830 + -0.8 462,830 + -0.5 462,830 + -0.0 462,831 - -1.0 462,831 - -2.2 462,831 - +0.6 462,846 + +1.3 462,881 + -1.0 462,881 + -1.1 462,882 - -1.0 462,882 - +0.6 462,924 - +0.1 462,924 - +0.5 462,981 + +0.1 462,981 + +0.1 462,982 - -0.0 462,985 + -0.9 462,986 - -1.3 462,989 - -2.5 462,991 + +2.6 463,074 + -0.2 463,074 + -1.7 463,074 + -0.8 463,074 + -0.0 463,074 + +0.3 463,075 - -0.3 463,075 - +0.8 463,075 - +0.6 463,075 - +0.3 463,075 - +0.3 463,077 + -0.6 463,077 + +0.5 463,078 - -1.2 463,078 - -2.0 463,193 + +0.9 463,193 + -0.4 463,193 + +3.2 463,194 - +1.1 463,194 - +0.8 463,226 + -0.0 463,226 + +0.7 463,271 + +0.0 463,271 + -3.7 463,271 + -0.6 463,271 + +0.2 463,271 + -1.1 463,271 + +1.1 463,271 + -0.0 463,272 - +0.6 463,272 - -1.9 463,272 - -3.0 463,272 - -0.0 463,272 - -0.8 463,272 - +1.9 463,275 + +1.6 463,275 + -2.3 463,275 + -0.2 463,275 + +0.6 463,275 + +0.8 463,275 + +2.2 463,275 + +0.7 463,275 + -0.2 463,276 - +1.2 463,276 - +0.1 463,276 - +1.4 463,276 - -0.3 463,276 - -0.5 463,276 - -0.0 463,276 - -0.3 463,276 - -0.8 463,276 - -0.0 463,276 - -3.0 463,276 - -1.7 463,276 - -0.1 463,276 - +0.0 463,276 - -0.8 463,364 - -0.5 463,770 + -1.0 463,770 + -0.9 463,770 + +0.1 463,770 + +1.1 463,770 + +1.5 463,770 + -0.4 463,770 + +0.5 463,770 + +1.0 463,771 - -0.1 463,771 - +1.2 463,771 - +1.7 463,771 - +1.3 463,771 - +1.8 463,771 - +0.5 463,772 + +1.4 463,772 + +1.5 463,772 + +1.2 463,772 + -0.5 463,772 + +1.7 463,772 + +1.2 463,772 + -2.2 463,772 + +0.0 463,772 + +1.4 463,772 + +0.3 463,772 + -0.1 463,773 - +0.4 463,773 - -0.1 463,773 - -2.9 463,773 - -0.8 463,773 - -0.5 463,773 - +0.9 463,773 - -0.4 463,776 + +0.6 463,776 + +2.4 463,776 + -0.7 463,776 + -1.6 463,777 - -0.0 463,777 - +0.2 464,016 + Ac3H11_2227 0.39 +0.1 464,016 + Ac3H11_2227 0.39 -0.8 464,017 - Ac3H11_2227 0.40 +0.3 464,017 - Ac3H11_2227 0.40 +1.3 464,017 - Ac3H11_2227 0.40 -0.8 464,017 - Ac3H11_2227 0.40 +0.2 464,017 - Ac3H11_2227 0.40 +0.1 464,020 + Ac3H11_2227 0.40 -1.9 464,020 + Ac3H11_2227 0.40 +1.7 464,020 + Ac3H11_2227 0.40 -0.5 464,020 + Ac3H11_2227 0.40 -1.3 464,020 + Ac3H11_2227 0.40 -2.0 464,020 + Ac3H11_2227 0.40 -0.4 464,021 - Ac3H11_2227 0.40 +1.4 464,021 - Ac3H11_2227 0.40 +0.7 464,021 - Ac3H11_2227 0.40 +1.4 464,021 - Ac3H11_2227 0.40 -0.3 464,021 - Ac3H11_2227 0.40 -0.5 464,021 - Ac3H11_2227 0.40 -3.1 464,021 - Ac3H11_2227 0.40 +0.9 464,021 - Ac3H11_2227 0.40 -0.8 464,021 - Ac3H11_2227 0.40 -0.8 464,062 - Ac3H11_2227 0.46 -1.8 464,096 + Ac3H11_2227 0.51 -0.4 464,097 - Ac3H11_2227 0.51 -0.4 464,097 - Ac3H11_2227 0.51 -0.6 464,390 - +0.3 464,465 + -1.3 464,466 - +2.2 464,756 + Ac3H11_2228 0.27 -0.2 464,756 + Ac3H11_2228 0.27 -1.1 464,756 + Ac3H11_2228 0.27 -2.1 464,756 + Ac3H11_2228 0.27 -1.8 464,756 + Ac3H11_2228 0.27 +1.3 464,756 + Ac3H11_2228 0.27 +0.2 464,757 - Ac3H11_2228 0.27 +0.4 464,757 - Ac3H11_2228 0.27 +0.0 464,757 - Ac3H11_2228 0.27 -0.6 464,792 + Ac3H11_2228 0.30 -0.3 464,792 + Ac3H11_2228 0.30 +0.1 464,792 + Ac3H11_2228 0.30 +0.4 464,793 - Ac3H11_2228 0.30 -1.0 464,793 - Ac3H11_2228 0.30 +0.7 464,793 - Ac3H11_2228 0.30 +1.0 464,793 - Ac3H11_2228 0.30 +0.7 464,793 - Ac3H11_2228 0.30 +1.9 464,804 + Ac3H11_2228 0.31 +1.0 464,805 - Ac3H11_2228 0.31 +1.5 464,805 - Ac3H11_2228 0.31 +0.3 464,981 + Ac3H11_2228 0.45 +0.7
Or see this region's nucleotide sequence