Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2078 and Ac3H11_2079 are separated by 123 nucleotides Ac3H11_2079 and Ac3H11_2080 are separated by 178 nucleotides Ac3H11_2080 and Ac3H11_2081 are separated by 593 nucleotides
Ac3H11_2078 - D-mannose isomerase (EC 5.3.1.7) <small>(from data)</small>, at 303,500 to 304,774
_2078
Ac3H11_2079 - Membrane protein TerC, possibly involved in tellurium resistance, at 304,898 to 305,584
_2079
Ac3H11_2080 - hypothetical protein, at 305,763 to 305,879
_2080
Ac3H11_2081 - Gluconolactonase (EC 3.1.1.17), at 306,473 to 307,423
_2081
Position (kb) 305
306 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 304.816 kb on + strand at 304.817 kb on - strand at 304.949 kb on + strand at 304.950 kb on - strand at 304.983 kb on + strand, within Ac3H11_2079 at 304.983 kb on + strand, within Ac3H11_2079 at 304.983 kb on + strand, within Ac3H11_2079 at 304.983 kb on + strand, within Ac3H11_2079 at 304.983 kb on + strand, within Ac3H11_2079 at 304.983 kb on + strand, within Ac3H11_2079 at 304.983 kb on + strand, within Ac3H11_2079 at 304.983 kb on + strand, within Ac3H11_2079 at 304.984 kb on - strand, within Ac3H11_2079 at 304.984 kb on - strand, within Ac3H11_2079 at 304.984 kb on - strand, within Ac3H11_2079 at 304.984 kb on - strand, within Ac3H11_2079 at 304.984 kb on - strand, within Ac3H11_2079 at 304.984 kb on - strand, within Ac3H11_2079 at 305.010 kb on + strand, within Ac3H11_2079 at 305.010 kb on + strand, within Ac3H11_2079 at 305.010 kb on + strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.277 kb on + strand, within Ac3H11_2079 at 305.277 kb on + strand, within Ac3H11_2079 at 305.277 kb on + strand, within Ac3H11_2079 at 305.277 kb on + strand, within Ac3H11_2079 at 305.277 kb on + strand, within Ac3H11_2079 at 305.277 kb on + strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.414 kb on + strand, within Ac3H11_2079 at 305.415 kb on - strand, within Ac3H11_2079 at 305.415 kb on - strand, within Ac3H11_2079 at 305.415 kb on - strand, within Ac3H11_2079 at 305.576 kb on + strand at 305.577 kb on - strand at 305.577 kb on - strand at 305.577 kb on - strand at 305.577 kb on - strand at 305.577 kb on - strand at 305.577 kb on - strand at 305.585 kb on - strand at 305.585 kb on - strand at 305.600 kb on + strand at 305.600 kb on + strand at 305.600 kb on + strand at 305.600 kb on + strand at 305.600 kb on + strand at 305.600 kb on + strand at 305.601 kb on - strand at 305.601 kb on - strand at 305.665 kb on + strand at 305.665 kb on + strand at 305.666 kb on - strand at 305.666 kb on - strand at 305.666 kb on - strand at 305.693 kb on + strand at 305.693 kb on + strand at 305.693 kb on + strand at 305.693 kb on + strand at 305.693 kb on + strand at 305.694 kb on - strand at 305.703 kb on + strand at 305.704 kb on - strand at 305.704 kb on - strand at 305.840 kb on + strand, within Ac3H11_2080 at 305.840 kb on + strand, within Ac3H11_2080 at 305.841 kb on - strand, within Ac3H11_2080 at 305.841 kb on - strand, within Ac3H11_2080 at 305.841 kb on - strand, within Ac3H11_2080 at 305.841 kb on - strand, within Ac3H11_2080 at 305.858 kb on - strand, within Ac3H11_2080 at 305.858 kb on - strand, within Ac3H11_2080 at 305.858 kb on - strand, within Ac3H11_2080 at 305.870 kb on + strand at 305.870 kb on + strand at 305.870 kb on + strand at 305.870 kb on + strand at 305.871 kb on - strand at 305.871 kb on - strand at 305.871 kb on - strand at 305.871 kb on - strand at 305.871 kb on - strand at 305.871 kb on - strand at 305.926 kb on + strand at 305.927 kb on - strand at 305.948 kb on - strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.959 kb on - strand at 305.959 kb on - strand at 305.959 kb on - strand at 305.959 kb on - strand at 305.959 kb on - strand at 305.966 kb on + strand at 305.966 kb on + strand at 305.966 kb on + strand at 305.967 kb on - strand at 305.967 kb on - strand at 305.967 kb on - strand at 306.072 kb on + strand at 306.073 kb on - strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.077 kb on - strand at 306.077 kb on - strand at 306.077 kb on - strand at 306.077 kb on - strand at 306.077 kb on - strand at 306.077 kb on - strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.221 kb on - strand at 306.272 kb on + strand at 306.272 kb on + strand at 306.272 kb on + strand at 306.272 kb on + strand at 306.272 kb on + strand at 306.272 kb on + strand at 306.273 kb on - strand at 306.273 kb on - strand at 306.273 kb on - strand at 306.304 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 304,816 + -0.3 304,817 - -0.2 304,949 + -0.6 304,950 - +1.8 304,983 + Ac3H11_2079 0.12 +0.7 304,983 + Ac3H11_2079 0.12 -0.3 304,983 + Ac3H11_2079 0.12 +1.2 304,983 + Ac3H11_2079 0.12 -0.2 304,983 + Ac3H11_2079 0.12 +0.3 304,983 + Ac3H11_2079 0.12 -0.1 304,983 + Ac3H11_2079 0.12 -0.7 304,983 + Ac3H11_2079 0.12 -0.3 304,984 - Ac3H11_2079 0.13 -0.3 304,984 - Ac3H11_2079 0.13 -0.3 304,984 - Ac3H11_2079 0.13 -0.4 304,984 - Ac3H11_2079 0.13 +1.4 304,984 - Ac3H11_2079 0.13 +0.4 304,984 - Ac3H11_2079 0.13 -0.8 305,010 + Ac3H11_2079 0.16 +0.4 305,010 + Ac3H11_2079 0.16 +0.8 305,010 + Ac3H11_2079 0.16 -1.8 305,011 - Ac3H11_2079 0.16 -0.1 305,011 - Ac3H11_2079 0.16 +0.5 305,011 - Ac3H11_2079 0.16 +0.1 305,011 - Ac3H11_2079 0.16 -0.5 305,011 - Ac3H11_2079 0.16 -1.0 305,011 - Ac3H11_2079 0.16 +1.1 305,011 - Ac3H11_2079 0.16 +0.8 305,011 - Ac3H11_2079 0.16 +0.1 305,277 + Ac3H11_2079 0.55 -0.4 305,277 + Ac3H11_2079 0.55 +0.3 305,277 + Ac3H11_2079 0.55 -1.2 305,277 + Ac3H11_2079 0.55 +1.6 305,277 + Ac3H11_2079 0.55 +0.2 305,277 + Ac3H11_2079 0.55 +1.8 305,278 - Ac3H11_2079 0.55 -1.6 305,278 - Ac3H11_2079 0.55 +1.3 305,278 - Ac3H11_2079 0.55 -1.0 305,278 - Ac3H11_2079 0.55 -1.1 305,278 - Ac3H11_2079 0.55 -1.5 305,278 - Ac3H11_2079 0.55 -0.8 305,278 - Ac3H11_2079 0.55 -0.8 305,278 - Ac3H11_2079 0.55 -2.5 305,278 - Ac3H11_2079 0.55 +1.7 305,414 + Ac3H11_2079 0.75 +0.6 305,415 - Ac3H11_2079 0.75 -1.1 305,415 - Ac3H11_2079 0.75 -1.4 305,415 - Ac3H11_2079 0.75 +1.3 305,576 + -0.4 305,577 - -3.7 305,577 - +0.7 305,577 - +0.3 305,577 - +1.0 305,577 - -0.7 305,577 - -0.4 305,585 - -1.0 305,585 - -2.4 305,600 + +0.7 305,600 + -0.0 305,600 + -2.3 305,600 + +0.2 305,600 + -0.9 305,600 + +1.2 305,601 - +1.4 305,601 - -0.4 305,665 + +1.2 305,665 + +1.0 305,666 - -0.5 305,666 - +0.6 305,666 - +0.5 305,693 + -1.7 305,693 + +0.6 305,693 + +2.6 305,693 + +1.7 305,693 + -0.7 305,694 - -0.6 305,703 + +1.3 305,704 - +0.6 305,704 - +2.4 305,840 + Ac3H11_2080 0.66 -0.2 305,840 + Ac3H11_2080 0.66 -0.9 305,841 - Ac3H11_2080 0.67 +1.1 305,841 - Ac3H11_2080 0.67 -0.0 305,841 - Ac3H11_2080 0.67 -0.6 305,841 - Ac3H11_2080 0.67 +0.6 305,858 - Ac3H11_2080 0.81 +2.5 305,858 - Ac3H11_2080 0.81 +1.5 305,858 - Ac3H11_2080 0.81 -0.0 305,870 + +1.3 305,870 + +0.3 305,870 + +1.4 305,870 + +0.6 305,871 - -2.6 305,871 - -3.0 305,871 - +2.5 305,871 - +1.0 305,871 - +1.6 305,871 - -1.4 305,926 + -1.1 305,927 - +0.6 305,948 - -0.3 305,958 + -0.8 305,958 + +0.5 305,958 + -0.4 305,958 + -0.4 305,958 + +3.3 305,958 + -0.4 305,958 + +0.7 305,958 + +0.9 305,959 - +0.3 305,959 - -1.2 305,959 - -1.1 305,959 - +0.6 305,959 - +2.5 305,966 + -0.5 305,966 + -0.4 305,966 + -1.4 305,967 - +1.1 305,967 - +1.1 305,967 - -0.8 306,072 + -2.1 306,073 - -0.5 306,076 + -1.7 306,076 + +1.9 306,076 + +0.1 306,076 + +0.8 306,076 + -0.6 306,076 + -0.3 306,076 + +0.3 306,077 - -1.0 306,077 - -1.4 306,077 - +1.0 306,077 - +1.2 306,077 - -0.2 306,077 - -2.0 306,164 + +0.9 306,164 + -0.1 306,164 + -0.0 306,164 + -0.5 306,164 + +0.7 306,164 + +1.0 306,164 + +0.6 306,164 + -0.0 306,164 + -1.4 306,164 + +0.5 306,165 - -0.3 306,165 - +0.4 306,165 - +1.4 306,165 - +1.2 306,165 - -0.1 306,165 - -0.1 306,165 - -0.7 306,165 - +0.6 306,221 - +2.3 306,272 + -3.1 306,272 + +1.0 306,272 + -1.1 306,272 + -2.1 306,272 + -0.0 306,272 + -1.0 306,273 - +0.6 306,273 - -0.4 306,273 - -2.9 306,304 + -2.9
Or see this region's nucleotide sequence