Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1681 and Ac3H11_1682 are separated by 55 nucleotides Ac3H11_1682 and Ac3H11_1683 are separated by 148 nucleotides Ac3H11_1683 and Ac3H11_1684 are separated by 128 nucleotides Ac3H11_1684 and Ac3H11_1685 are separated by 33 nucleotides
Ac3H11_1681 - Similar to cobalamin biosynthesis protein CbiB, at 284,548 to 285,534
_1681
Ac3H11_1682 - Hypothetical nudix hydrolase YeaB, at 285,590 to 286,276
_1682
Ac3H11_1683 - LSU ribosomal protein L19p, at 286,425 to 286,811
_1683
Ac3H11_1684 - tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31), at 286,940 to 287,698
_1684
Ac3H11_1685 - 16S rRNA processing protein RimM, at 287,732 to 288,304
_1685
Position (kb) 286
287 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 285.547 kb on + strand at 285.547 kb on + strand at 285.547 kb on + strand at 285.575 kb on + strand at 285.575 kb on + strand at 285.575 kb on + strand at 285.575 kb on + strand at 285.575 kb on + strand at 285.576 kb on - strand at 285.576 kb on - strand at 285.576 kb on - strand at 285.576 kb on - strand at 285.609 kb on + strand at 285.672 kb on + strand, within Ac3H11_1682 at 285.787 kb on - strand, within Ac3H11_1682 at 285.787 kb on - strand, within Ac3H11_1682 at 285.864 kb on + strand, within Ac3H11_1682 at 285.864 kb on + strand, within Ac3H11_1682 at 285.864 kb on + strand, within Ac3H11_1682 at 285.864 kb on + strand, within Ac3H11_1682 at 285.864 kb on + strand, within Ac3H11_1682 at 285.864 kb on + strand, within Ac3H11_1682 at 285.864 kb on + strand, within Ac3H11_1682 at 285.864 kb on + strand, within Ac3H11_1682 at 285.864 kb on + strand, within Ac3H11_1682 at 285.864 kb on + strand, within Ac3H11_1682 at 285.864 kb on + strand, within Ac3H11_1682 at 285.865 kb on - strand, within Ac3H11_1682 at 285.865 kb on - strand, within Ac3H11_1682 at 285.865 kb on - strand, within Ac3H11_1682 at 285.865 kb on - strand, within Ac3H11_1682 at 285.865 kb on - strand, within Ac3H11_1682 at 285.865 kb on - strand, within Ac3H11_1682 at 285.865 kb on - strand, within Ac3H11_1682 at 285.865 kb on - strand, within Ac3H11_1682 at 286.373 kb on + strand at 286.388 kb on + strand at 286.388 kb on + strand at 286.388 kb on + strand at 286.389 kb on - strand at 286.389 kb on - strand at 286.426 kb on + strand at 286.426 kb on + strand at 286.426 kb on + strand at 286.934 kb on - strand at 287.736 kb on + strand at 287.736 kb on + strand at 287.737 kb on - strand at 287.737 kb on - strand at 287.737 kb on - strand at 287.737 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 285,547 + +2.0 285,547 + -0.2 285,547 + +1.0 285,575 + +3.0 285,575 + -2.1 285,575 + -2.7 285,575 + -1.3 285,575 + +1.0 285,576 - +0.4 285,576 - -1.2 285,576 - +1.8 285,576 - +0.9 285,609 + -2.7 285,672 + Ac3H11_1682 0.12 +1.8 285,787 - Ac3H11_1682 0.29 -2.8 285,787 - Ac3H11_1682 0.29 +0.3 285,864 + Ac3H11_1682 0.40 -0.7 285,864 + Ac3H11_1682 0.40 -1.2 285,864 + Ac3H11_1682 0.40 +0.2 285,864 + Ac3H11_1682 0.40 +1.6 285,864 + Ac3H11_1682 0.40 +0.9 285,864 + Ac3H11_1682 0.40 +0.6 285,864 + Ac3H11_1682 0.40 -3.0 285,864 + Ac3H11_1682 0.40 +0.2 285,864 + Ac3H11_1682 0.40 -1.5 285,864 + Ac3H11_1682 0.40 +1.4 285,864 + Ac3H11_1682 0.40 -1.2 285,865 - Ac3H11_1682 0.40 -2.7 285,865 - Ac3H11_1682 0.40 -2.8 285,865 - Ac3H11_1682 0.40 +1.5 285,865 - Ac3H11_1682 0.40 -1.9 285,865 - Ac3H11_1682 0.40 +1.6 285,865 - Ac3H11_1682 0.40 +1.4 285,865 - Ac3H11_1682 0.40 +0.9 285,865 - Ac3H11_1682 0.40 -0.1 286,373 + +0.8 286,388 + +2.3 286,388 + +0.8 286,388 + -3.7 286,389 - +0.8 286,389 - -1.8 286,426 + -0.2 286,426 + -0.6 286,426 + +1.7 286,934 - -0.8 287,736 + +0.3 287,736 + -0.7 287,737 - -0.5 287,737 - -3.0 287,737 - -0.7 287,737 - -2.1
Or see this region's nucleotide sequence