Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1673 and Ac3H11_1674 are separated by 76 nucleotides Ac3H11_1674 and Ac3H11_1675 are separated by 146 nucleotides
Ac3H11_1673 - MFS transporter, at 275,823 to 277,055
_1673
Ac3H11_1674 - GGDEF family protein, at 277,132 to 278,604
_1674
Ac3H11_1675 - ATP-dependent RNA helicase NGO0650, at 278,751 to 280,616
_1675
Position (kb) 277
278
279 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 276.261 kb on + strand, within Ac3H11_1673 at 276.261 kb on + strand, within Ac3H11_1673 at 276.262 kb on - strand, within Ac3H11_1673 at 276.262 kb on - strand, within Ac3H11_1673 at 276.262 kb on - strand, within Ac3H11_1673 at 276.262 kb on - strand, within Ac3H11_1673 at 276.381 kb on + strand, within Ac3H11_1673 at 276.382 kb on - strand, within Ac3H11_1673 at 276.382 kb on - strand, within Ac3H11_1673 at 276.382 kb on - strand, within Ac3H11_1673 at 276.382 kb on - strand, within Ac3H11_1673 at 276.431 kb on + strand, within Ac3H11_1673 at 276.432 kb on - strand, within Ac3H11_1673 at 276.453 kb on + strand, within Ac3H11_1673 at 276.454 kb on - strand, within Ac3H11_1673 at 276.454 kb on - strand, within Ac3H11_1673 at 276.454 kb on - strand, within Ac3H11_1673 at 276.531 kb on + strand, within Ac3H11_1673 at 276.531 kb on + strand, within Ac3H11_1673 at 276.532 kb on - strand, within Ac3H11_1673 at 276.532 kb on - strand, within Ac3H11_1673 at 276.532 kb on - strand, within Ac3H11_1673 at 276.682 kb on + strand, within Ac3H11_1673 at 276.682 kb on + strand, within Ac3H11_1673 at 276.682 kb on + strand, within Ac3H11_1673 at 276.682 kb on + strand, within Ac3H11_1673 at 276.683 kb on - strand, within Ac3H11_1673 at 276.683 kb on - strand, within Ac3H11_1673 at 276.683 kb on - strand, within Ac3H11_1673 at 276.683 kb on - strand, within Ac3H11_1673 at 276.783 kb on + strand, within Ac3H11_1673 at 277.005 kb on + strand at 277.005 kb on + strand at 277.005 kb on + strand at 277.005 kb on + strand at 277.005 kb on + strand at 277.006 kb on - strand at 277.006 kb on - strand at 277.006 kb on - strand at 277.006 kb on - strand at 277.175 kb on + strand at 277.175 kb on + strand at 277.175 kb on + strand at 277.175 kb on + strand at 277.175 kb on + strand at 277.175 kb on + strand at 277.175 kb on + strand at 277.176 kb on - strand at 277.176 kb on - strand at 277.176 kb on - strand at 277.176 kb on - strand at 277.176 kb on - strand at 277.176 kb on - strand at 277.176 kb on - strand at 277.196 kb on + strand at 277.196 kb on + strand at 277.196 kb on + strand at 277.196 kb on + strand at 277.196 kb on + strand at 277.196 kb on + strand at 277.196 kb on + strand at 277.196 kb on + strand at 277.196 kb on + strand at 277.196 kb on + strand at 277.196 kb on + strand at 277.196 kb on + strand at 277.196 kb on + strand at 277.196 kb on + strand at 277.197 kb on - strand at 277.197 kb on - strand at 277.197 kb on - strand at 277.197 kb on - strand at 277.197 kb on - strand at 277.197 kb on - strand at 277.197 kb on - strand at 277.197 kb on - strand at 277.197 kb on - strand at 277.197 kb on - strand at 277.197 kb on - strand at 277.530 kb on + strand, within Ac3H11_1674 at 277.530 kb on + strand, within Ac3H11_1674 at 277.530 kb on + strand, within Ac3H11_1674 at 277.531 kb on - strand, within Ac3H11_1674 at 277.531 kb on - strand, within Ac3H11_1674 at 277.531 kb on - strand, within Ac3H11_1674 at 277.531 kb on - strand, within Ac3H11_1674 at 277.580 kb on + strand, within Ac3H11_1674 at 277.580 kb on + strand, within Ac3H11_1674 at 277.580 kb on + strand, within Ac3H11_1674 at 277.581 kb on - strand, within Ac3H11_1674 at 277.581 kb on - strand, within Ac3H11_1674 at 277.581 kb on - strand, within Ac3H11_1674 at 277.581 kb on - strand, within Ac3H11_1674 at 277.605 kb on + strand, within Ac3H11_1674 at 277.606 kb on - strand, within Ac3H11_1674 at 277.606 kb on - strand, within Ac3H11_1674 at 277.609 kb on + strand, within Ac3H11_1674 at 277.609 kb on + strand, within Ac3H11_1674 at 277.609 kb on + strand, within Ac3H11_1674 at 277.609 kb on + strand, within Ac3H11_1674 at 277.609 kb on + strand, within Ac3H11_1674 at 277.609 kb on + strand, within Ac3H11_1674 at 277.609 kb on + strand, within Ac3H11_1674 at 277.609 kb on + strand, within Ac3H11_1674 at 277.609 kb on + strand at 277.609 kb on + strand, within Ac3H11_1674 at 277.609 kb on + strand, within Ac3H11_1674 at 277.609 kb on + strand, within Ac3H11_1674 at 277.610 kb on - strand, within Ac3H11_1674 at 277.610 kb on - strand, within Ac3H11_1674 at 277.610 kb on - strand, within Ac3H11_1674 at 277.610 kb on - strand, within Ac3H11_1674 at 277.610 kb on - strand, within Ac3H11_1674 at 277.610 kb on - strand, within Ac3H11_1674 at 277.610 kb on - strand, within Ac3H11_1674 at 277.610 kb on - strand, within Ac3H11_1674 at 277.610 kb on - strand, within Ac3H11_1674 at 277.610 kb on - strand, within Ac3H11_1674 at 277.610 kb on - strand, within Ac3H11_1674 at 277.610 kb on - strand, within Ac3H11_1674 at 277.610 kb on - strand, within Ac3H11_1674 at 277.624 kb on + strand, within Ac3H11_1674 at 277.625 kb on - strand, within Ac3H11_1674 at 277.625 kb on - strand, within Ac3H11_1674 at 277.625 kb on - strand, within Ac3H11_1674 at 277.628 kb on + strand, within Ac3H11_1674 at 277.629 kb on - strand, within Ac3H11_1674 at 277.629 kb on - strand, within Ac3H11_1674 at 277.629 kb on - strand, within Ac3H11_1674 at 277.629 kb on - strand, within Ac3H11_1674 at 277.629 kb on - strand, within Ac3H11_1674 at 277.629 kb on - strand, within Ac3H11_1674 at 277.637 kb on + strand, within Ac3H11_1674 at 277.637 kb on + strand, within Ac3H11_1674 at 277.638 kb on - strand, within Ac3H11_1674 at 277.638 kb on - strand, within Ac3H11_1674 at 277.711 kb on - strand, within Ac3H11_1674 at 277.763 kb on + strand, within Ac3H11_1674 at 277.763 kb on + strand, within Ac3H11_1674 at 277.763 kb on + strand, within Ac3H11_1674 at 277.764 kb on - strand, within Ac3H11_1674 at 277.764 kb on - strand, within Ac3H11_1674 at 278.097 kb on - strand, within Ac3H11_1674 at 278.197 kb on + strand, within Ac3H11_1674 at 278.197 kb on + strand, within Ac3H11_1674 at 278.198 kb on - strand, within Ac3H11_1674 at 278.198 kb on - strand, within Ac3H11_1674 at 278.198 kb on - strand, within Ac3H11_1674 at 278.198 kb on - strand, within Ac3H11_1674 at 278.243 kb on + strand, within Ac3H11_1674 at 278.243 kb on + strand, within Ac3H11_1674 at 278.243 kb on + strand, within Ac3H11_1674 at 278.243 kb on + strand, within Ac3H11_1674 at 278.244 kb on - strand, within Ac3H11_1674 at 278.244 kb on - strand, within Ac3H11_1674 at 278.244 kb on - strand, within Ac3H11_1674 at 278.244 kb on - strand, within Ac3H11_1674 at 278.244 kb on - strand, within Ac3H11_1674 at 278.470 kb on + strand at 278.470 kb on + strand at 278.470 kb on + strand at 278.470 kb on + strand at 278.470 kb on + strand at 278.470 kb on + strand at 278.470 kb on + strand at 278.470 kb on + strand at 278.470 kb on + strand at 278.470 kb on + strand at 278.470 kb on + strand at 278.470 kb on + strand at 278.470 kb on + strand at 278.470 kb on + strand at 278.471 kb on - strand at 278.471 kb on - strand at 278.471 kb on - strand at 278.471 kb on - strand at 278.471 kb on - strand at 278.471 kb on - strand at 278.471 kb on - strand at 278.471 kb on - strand at 278.471 kb on - strand at 278.471 kb on - strand at 278.471 kb on - strand at 278.471 kb on - strand at 278.471 kb on - strand at 278.471 kb on - strand at 278.471 kb on - strand at 278.573 kb on + strand at 278.627 kb on + strand at 278.628 kb on - strand at 278.663 kb on + strand at 278.664 kb on - strand at 278.935 kb on + strand at 278.936 kb on - strand at 279.136 kb on + strand, within Ac3H11_1675 at 279.137 kb on - strand, within Ac3H11_1675
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 276,261 + Ac3H11_1673 0.36 -0.1 276,261 + Ac3H11_1673 0.36 +0.7 276,262 - Ac3H11_1673 0.36 +0.1 276,262 - Ac3H11_1673 0.36 -1.2 276,262 - Ac3H11_1673 0.36 -0.7 276,262 - Ac3H11_1673 0.36 +0.3 276,381 + Ac3H11_1673 0.45 +0.2 276,382 - Ac3H11_1673 0.45 +1.1 276,382 - Ac3H11_1673 0.45 +0.8 276,382 - Ac3H11_1673 0.45 -2.2 276,382 - Ac3H11_1673 0.45 -0.1 276,431 + Ac3H11_1673 0.49 -0.0 276,432 - Ac3H11_1673 0.49 -0.4 276,453 + Ac3H11_1673 0.51 -3.2 276,454 - Ac3H11_1673 0.51 -1.2 276,454 - Ac3H11_1673 0.51 +0.3 276,454 - Ac3H11_1673 0.51 -2.1 276,531 + Ac3H11_1673 0.57 +0.9 276,531 + Ac3H11_1673 0.57 +0.4 276,532 - Ac3H11_1673 0.58 +0.3 276,532 - Ac3H11_1673 0.58 -0.3 276,532 - Ac3H11_1673 0.58 -1.0 276,682 + Ac3H11_1673 0.70 -0.8 276,682 + Ac3H11_1673 0.70 -1.4 276,682 + Ac3H11_1673 0.70 -1.2 276,682 + Ac3H11_1673 0.70 -0.2 276,683 - Ac3H11_1673 0.70 -1.2 276,683 - Ac3H11_1673 0.70 -1.8 276,683 - Ac3H11_1673 0.70 +1.8 276,683 - Ac3H11_1673 0.70 +1.1 276,783 + Ac3H11_1673 0.78 +0.8 277,005 + -0.4 277,005 + +1.2 277,005 + +0.8 277,005 + -0.7 277,005 + +0.4 277,006 - +0.6 277,006 - +0.0 277,006 - -1.8 277,006 - -2.4 277,175 + -0.4 277,175 + +0.2 277,175 + +3.5 277,175 + -0.3 277,175 + -1.2 277,175 + +0.3 277,175 + -0.3 277,176 - -0.8 277,176 - -1.1 277,176 - +0.2 277,176 - -1.7 277,176 - +0.7 277,176 - -1.4 277,176 - +1.3 277,196 + +0.5 277,196 + +0.7 277,196 + +0.3 277,196 + +1.2 277,196 + -2.1 277,196 + -2.8 277,196 + -1.4 277,196 + -0.8 277,196 + -2.8 277,196 + -0.9 277,196 + +0.4 277,196 + +0.1 277,196 + +0.1 277,196 + -1.0 277,197 - +0.6 277,197 - +1.4 277,197 - +1.8 277,197 - +0.8 277,197 - +0.3 277,197 - +1.1 277,197 - -1.3 277,197 - +0.7 277,197 - +0.2 277,197 - -0.5 277,197 - +0.2 277,530 + Ac3H11_1674 0.27 -1.2 277,530 + Ac3H11_1674 0.27 +0.2 277,530 + Ac3H11_1674 0.27 +0.6 277,531 - Ac3H11_1674 0.27 +0.2 277,531 - Ac3H11_1674 0.27 +0.8 277,531 - Ac3H11_1674 0.27 +2.2 277,531 - Ac3H11_1674 0.27 -1.9 277,580 + Ac3H11_1674 0.30 -1.4 277,580 + Ac3H11_1674 0.30 -0.5 277,580 + Ac3H11_1674 0.30 -1.3 277,581 - Ac3H11_1674 0.30 +0.5 277,581 - Ac3H11_1674 0.30 -0.9 277,581 - Ac3H11_1674 0.30 +0.4 277,581 - Ac3H11_1674 0.30 -1.1 277,605 + Ac3H11_1674 0.32 +0.2 277,606 - Ac3H11_1674 0.32 -1.1 277,606 - Ac3H11_1674 0.32 -1.4 277,609 + Ac3H11_1674 0.32 +1.1 277,609 + Ac3H11_1674 0.32 +2.4 277,609 + Ac3H11_1674 0.32 +0.3 277,609 + Ac3H11_1674 0.32 +1.3 277,609 + Ac3H11_1674 0.32 +0.4 277,609 + Ac3H11_1674 0.32 +0.7 277,609 + Ac3H11_1674 0.32 +0.6 277,609 + Ac3H11_1674 0.32 -3.3 277,609 + -0.0 277,609 + Ac3H11_1674 0.32 -1.5 277,609 + Ac3H11_1674 0.32 -0.9 277,609 + Ac3H11_1674 0.32 +0.8 277,610 - Ac3H11_1674 0.32 -1.2 277,610 - Ac3H11_1674 0.32 +0.3 277,610 - Ac3H11_1674 0.32 +1.9 277,610 - Ac3H11_1674 0.32 +1.0 277,610 - Ac3H11_1674 0.32 -0.3 277,610 - Ac3H11_1674 0.32 -0.0 277,610 - Ac3H11_1674 0.32 -1.8 277,610 - Ac3H11_1674 0.32 -1.8 277,610 - Ac3H11_1674 0.32 +0.4 277,610 - Ac3H11_1674 0.32 +1.6 277,610 - Ac3H11_1674 0.32 -1.7 277,610 - Ac3H11_1674 0.32 -1.7 277,610 - Ac3H11_1674 0.32 +1.1 277,624 + Ac3H11_1674 0.33 -1.1 277,625 - Ac3H11_1674 0.33 +0.6 277,625 - Ac3H11_1674 0.33 -3.6 277,625 - Ac3H11_1674 0.33 +1.6 277,628 + Ac3H11_1674 0.34 -0.5 277,629 - Ac3H11_1674 0.34 +0.5 277,629 - Ac3H11_1674 0.34 -1.2 277,629 - Ac3H11_1674 0.34 +0.6 277,629 - Ac3H11_1674 0.34 -0.1 277,629 - Ac3H11_1674 0.34 -3.8 277,629 - Ac3H11_1674 0.34 +0.1 277,637 + Ac3H11_1674 0.34 +0.7 277,637 + Ac3H11_1674 0.34 +3.2 277,638 - Ac3H11_1674 0.34 -0.6 277,638 - Ac3H11_1674 0.34 +2.0 277,711 - Ac3H11_1674 0.39 +0.8 277,763 + Ac3H11_1674 0.43 -2.6 277,763 + Ac3H11_1674 0.43 -1.2 277,763 + Ac3H11_1674 0.43 -2.2 277,764 - Ac3H11_1674 0.43 -3.2 277,764 - Ac3H11_1674 0.43 -1.2 278,097 - Ac3H11_1674 0.66 -0.2 278,197 + Ac3H11_1674 0.72 +1.7 278,197 + Ac3H11_1674 0.72 -2.4 278,198 - Ac3H11_1674 0.72 -1.6 278,198 - Ac3H11_1674 0.72 -0.7 278,198 - Ac3H11_1674 0.72 -2.8 278,198 - Ac3H11_1674 0.72 -1.5 278,243 + Ac3H11_1674 0.75 -0.2 278,243 + Ac3H11_1674 0.75 -3.3 278,243 + Ac3H11_1674 0.75 +0.8 278,243 + Ac3H11_1674 0.75 +0.4 278,244 - Ac3H11_1674 0.75 -0.6 278,244 - Ac3H11_1674 0.75 +1.6 278,244 - Ac3H11_1674 0.75 -0.2 278,244 - Ac3H11_1674 0.75 +0.4 278,244 - Ac3H11_1674 0.75 +0.2 278,470 + -0.8 278,470 + -3.5 278,470 + +1.3 278,470 + -2.5 278,470 + +1.6 278,470 + +0.6 278,470 + +1.2 278,470 + +1.2 278,470 + -0.8 278,470 + +1.0 278,470 + +0.6 278,470 + -0.0 278,470 + +1.6 278,470 + -0.1 278,471 - +0.6 278,471 - +0.2 278,471 - +1.8 278,471 - +0.5 278,471 - -0.5 278,471 - +0.8 278,471 - -0.1 278,471 - +1.3 278,471 - -0.3 278,471 - +0.2 278,471 - +0.6 278,471 - +0.3 278,471 - -0.9 278,471 - +0.8 278,471 - -2.4 278,573 + +0.2 278,627 + +1.5 278,628 - +0.1 278,663 + +1.5 278,664 - +0.2 278,935 + -1.1 278,936 - -0.0 279,136 + Ac3H11_1675 0.21 +0.8 279,137 - Ac3H11_1675 0.21 +0.9
Or see this region's nucleotide sequence