Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1337 and Ac3H11_1338 are separated by 864 nucleotides Ac3H11_1338 and Ac3H11_1339 are separated by 30 nucleotides Ac3H11_1339 and Ac3H11_1340 overlap by 4 nucleotides
Ac3H11_1337 - Ferrous iron transport protein, at 25,700 to 26,038
_1337
Ac3H11_1338 - Mobile element protein, at 26,903 to 27,022
_1338
Ac3H11_1339 - Mobile element protein, at 27,053 to 27,376
_1339
Ac3H11_1340 - Mobile element protein, at 27,373 to 28,287
_1340
Position (kb) 26
27
28 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 26.199 kb on + strand at 26.199 kb on + strand at 26.199 kb on + strand at 26.199 kb on + strand at 26.200 kb on - strand at 26.200 kb on - strand at 26.200 kb on - strand at 26.200 kb on - strand at 26.200 kb on - strand at 26.304 kb on + strand at 26.370 kb on + strand at 26.370 kb on + strand at 26.371 kb on - strand at 26.468 kb on + strand at 26.477 kb on + strand at 26.477 kb on + strand at 26.477 kb on + strand at 26.477 kb on + strand at 26.477 kb on + strand at 26.477 kb on + strand at 26.477 kb on + strand at 26.477 kb on + strand at 26.478 kb on - strand at 26.478 kb on - strand at 26.520 kb on + strand at 26.520 kb on + strand at 26.521 kb on - strand at 26.521 kb on - strand at 26.527 kb on - strand at 26.538 kb on + strand at 26.538 kb on + strand at 26.538 kb on + strand at 26.538 kb on + strand at 26.539 kb on - strand at 26.700 kb on - strand at 26.731 kb on + strand at 26.731 kb on + strand at 26.731 kb on + strand at 26.732 kb on - strand at 26.742 kb on + strand at 26.742 kb on + strand at 26.743 kb on - strand at 26.755 kb on + strand at 26.756 kb on - strand at 26.826 kb on + strand at 26.826 kb on + strand at 26.826 kb on + strand at 26.827 kb on - strand at 26.827 kb on - strand at 26.827 kb on - strand at 26.827 kb on - strand at 26.828 kb on + strand at 26.828 kb on + strand at 26.828 kb on + strand at 26.829 kb on - strand at 26.829 kb on - strand at 26.829 kb on - strand at 27.128 kb on + strand, within Ac3H11_1339 at 27.382 kb on + strand at 27.382 kb on + strand at 27.382 kb on + strand at 27.382 kb on + strand at 27.382 kb on + strand at 27.382 kb on + strand at 27.382 kb on + strand at 27.382 kb on + strand at 27.382 kb on + strand at 27.382 kb on + strand at 27.382 kb on + strand at 27.383 kb on - strand at 27.383 kb on - strand at 27.383 kb on - strand at 27.383 kb on - strand at 27.383 kb on - strand at 27.383 kb on - strand at 27.406 kb on + strand at 27.406 kb on + strand at 27.406 kb on + strand at 27.407 kb on - strand at 27.407 kb on - strand at 27.454 kb on + strand at 27.455 kb on - strand at 27.568 kb on + strand, within Ac3H11_1340 at 27.568 kb on + strand, within Ac3H11_1340 at 27.569 kb on - strand, within Ac3H11_1340 at 27.569 kb on - strand, within Ac3H11_1340 at 27.580 kb on - strand, within Ac3H11_1340 at 27.790 kb on + strand, within Ac3H11_1340 at 27.790 kb on + strand, within Ac3H11_1340 at 27.790 kb on + strand, within Ac3H11_1340 at 27.790 kb on + strand, within Ac3H11_1340 at 27.790 kb on + strand, within Ac3H11_1340 at 27.790 kb on + strand, within Ac3H11_1340 at 27.790 kb on + strand, within Ac3H11_1340 at 27.790 kb on + strand, within Ac3H11_1340 at 27.791 kb on - strand, within Ac3H11_1340 at 27.791 kb on - strand, within Ac3H11_1340 at 27.791 kb on - strand, within Ac3H11_1340 at 27.791 kb on - strand, within Ac3H11_1340 at 27.791 kb on - strand, within Ac3H11_1340 at 27.791 kb on - strand, within Ac3H11_1340 at 27.791 kb on - strand, within Ac3H11_1340 at 27.791 kb on - strand, within Ac3H11_1340 at 27.791 kb on - strand, within Ac3H11_1340 at 27.791 kb on - strand, within Ac3H11_1340 at 27.791 kb on - strand, within Ac3H11_1340 at 27.817 kb on + strand, within Ac3H11_1340 at 27.817 kb on + strand, within Ac3H11_1340 at 27.817 kb on + strand, within Ac3H11_1340 at 27.817 kb on + strand, within Ac3H11_1340 at 27.817 kb on + strand, within Ac3H11_1340 at 27.817 kb on + strand, within Ac3H11_1340 at 27.817 kb on + strand, within Ac3H11_1340 at 27.817 kb on + strand, within Ac3H11_1340 at 27.818 kb on - strand, within Ac3H11_1340 at 27.818 kb on - strand, within Ac3H11_1340 at 27.818 kb on - strand, within Ac3H11_1340 at 27.818 kb on - strand, within Ac3H11_1340 at 27.818 kb on - strand, within Ac3H11_1340 at 27.818 kb on - strand, within Ac3H11_1340 at 27.841 kb on + strand, within Ac3H11_1340 at 27.841 kb on + strand, within Ac3H11_1340 at 27.841 kb on + strand, within Ac3H11_1340 at 27.841 kb on + strand, within Ac3H11_1340 at 27.842 kb on - strand, within Ac3H11_1340 at 27.842 kb on - strand, within Ac3H11_1340 at 27.842 kb on - strand, within Ac3H11_1340 at 27.922 kb on + strand, within Ac3H11_1340 at 27.922 kb on + strand, within Ac3H11_1340 at 27.922 kb on + strand, within Ac3H11_1340 at 27.923 kb on - strand, within Ac3H11_1340 at 27.923 kb on - strand, within Ac3H11_1340 at 27.923 kb on - strand, within Ac3H11_1340 at 27.923 kb on - strand, within Ac3H11_1340 at 27.923 kb on - strand, within Ac3H11_1340 at 27.979 kb on + strand, within Ac3H11_1340 at 27.979 kb on + strand, within Ac3H11_1340 at 27.979 kb on + strand, within Ac3H11_1340 at 27.980 kb on - strand, within Ac3H11_1340 at 27.980 kb on - strand, within Ac3H11_1340 at 27.980 kb on - strand, within Ac3H11_1340 at 27.980 kb on - strand, within Ac3H11_1340 at 27.980 kb on - strand, within Ac3H11_1340 at 27.994 kb on + strand, within Ac3H11_1340 at 27.994 kb on + strand, within Ac3H11_1340 at 27.995 kb on - strand, within Ac3H11_1340 at 27.995 kb on - strand, within Ac3H11_1340 at 28.022 kb on + strand, within Ac3H11_1340 at 28.022 kb on + strand at 28.022 kb on + strand, within Ac3H11_1340 at 28.022 kb on + strand, within Ac3H11_1340
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 26,199 + -0.3 26,199 + -2.1 26,199 + -0.2 26,199 + -0.6 26,200 - -1.2 26,200 - -0.1 26,200 - +0.6 26,200 - +0.0 26,200 - +3.5 26,304 + -0.4 26,370 + -0.8 26,370 + -2.0 26,371 - +2.4 26,468 + -1.1 26,477 + +0.5 26,477 + -0.9 26,477 + -1.4 26,477 + +0.2 26,477 + +2.0 26,477 + -1.7 26,477 + -0.2 26,477 + -0.6 26,478 - +1.7 26,478 - -2.8 26,520 + +1.5 26,520 + +0.3 26,521 - -0.4 26,521 - -1.2 26,527 - -0.4 26,538 + -1.6 26,538 + -0.4 26,538 + +0.5 26,538 + +0.6 26,539 - -1.4 26,700 - -2.6 26,731 + -1.1 26,731 + -0.8 26,731 + -0.5 26,732 - -1.2 26,742 + -1.7 26,742 + +0.1 26,743 - -1.4 26,755 + -1.6 26,756 - +1.1 26,826 + +0.5 26,826 + -2.8 26,826 + -1.4 26,827 - -0.7 26,827 - -0.9 26,827 - +0.3 26,827 - -1.2 26,828 + +0.4 26,828 + -1.8 26,828 + -0.8 26,829 - +2.1 26,829 - +1.1 26,829 - -1.1 27,128 + Ac3H11_1339 0.23 +1.6 27,382 + -2.6 27,382 + -1.2 27,382 + +0.7 27,382 + -2.2 27,382 + +1.2 27,382 + +1.0 27,382 + -1.0 27,382 + +0.0 27,382 + +0.7 27,382 + +0.2 27,382 + +2.1 27,383 - +1.8 27,383 - -0.4 27,383 - +0.2 27,383 - +1.9 27,383 - +1.0 27,383 - -0.4 27,406 + +0.0 27,406 + -2.0 27,406 + +1.4 27,407 - +1.3 27,407 - -0.9 27,454 + -1.6 27,455 - +0.4 27,568 + Ac3H11_1340 0.21 -1.6 27,568 + Ac3H11_1340 0.21 +0.1 27,569 - Ac3H11_1340 0.21 +0.7 27,569 - Ac3H11_1340 0.21 -2.0 27,580 - Ac3H11_1340 0.23 +0.7 27,790 + Ac3H11_1340 0.46 -0.0 27,790 + Ac3H11_1340 0.46 -1.8 27,790 + Ac3H11_1340 0.46 -1.4 27,790 + Ac3H11_1340 0.46 +1.6 27,790 + Ac3H11_1340 0.46 +0.1 27,790 + Ac3H11_1340 0.46 +0.7 27,790 + Ac3H11_1340 0.46 -0.0 27,790 + Ac3H11_1340 0.46 -0.8 27,791 - Ac3H11_1340 0.46 -0.3 27,791 - Ac3H11_1340 0.46 +1.0 27,791 - Ac3H11_1340 0.46 -3.4 27,791 - Ac3H11_1340 0.46 -3.0 27,791 - Ac3H11_1340 0.46 +0.2 27,791 - Ac3H11_1340 0.46 +0.2 27,791 - Ac3H11_1340 0.46 +0.0 27,791 - Ac3H11_1340 0.46 +0.4 27,791 - Ac3H11_1340 0.46 +1.0 27,791 - Ac3H11_1340 0.46 +0.7 27,791 - Ac3H11_1340 0.46 +1.0 27,817 + Ac3H11_1340 0.49 -2.6 27,817 + Ac3H11_1340 0.49 -1.9 27,817 + Ac3H11_1340 0.49 -2.3 27,817 + Ac3H11_1340 0.49 +0.5 27,817 + Ac3H11_1340 0.49 +0.7 27,817 + Ac3H11_1340 0.49 -1.2 27,817 + Ac3H11_1340 0.49 -1.1 27,817 + Ac3H11_1340 0.49 +1.3 27,818 - Ac3H11_1340 0.49 -0.5 27,818 - Ac3H11_1340 0.49 -2.2 27,818 - Ac3H11_1340 0.49 -1.0 27,818 - Ac3H11_1340 0.49 +0.2 27,818 - Ac3H11_1340 0.49 +0.4 27,818 - Ac3H11_1340 0.49 +0.0 27,841 + Ac3H11_1340 0.51 +0.7 27,841 + Ac3H11_1340 0.51 -0.6 27,841 + Ac3H11_1340 0.51 -2.3 27,841 + Ac3H11_1340 0.51 -1.1 27,842 - Ac3H11_1340 0.51 -2.8 27,842 - Ac3H11_1340 0.51 -0.1 27,842 - Ac3H11_1340 0.51 -1.0 27,922 + Ac3H11_1340 0.60 -3.1 27,922 + Ac3H11_1340 0.60 +0.1 27,922 + Ac3H11_1340 0.60 -2.0 27,923 - Ac3H11_1340 0.60 -3.2 27,923 - Ac3H11_1340 0.60 +0.0 27,923 - Ac3H11_1340 0.60 -2.6 27,923 - Ac3H11_1340 0.60 -2.5 27,923 - Ac3H11_1340 0.60 +0.7 27,979 + Ac3H11_1340 0.66 -1.6 27,979 + Ac3H11_1340 0.66 -0.3 27,979 + Ac3H11_1340 0.66 +3.3 27,980 - Ac3H11_1340 0.66 -1.6 27,980 - Ac3H11_1340 0.66 -2.6 27,980 - Ac3H11_1340 0.66 -2.7 27,980 - Ac3H11_1340 0.66 +0.1 27,980 - Ac3H11_1340 0.66 -0.1 27,994 + Ac3H11_1340 0.68 +0.2 27,994 + Ac3H11_1340 0.68 +2.4 27,995 - Ac3H11_1340 0.68 -1.2 27,995 - Ac3H11_1340 0.68 +0.0 28,022 + Ac3H11_1340 0.71 -0.4 28,022 + +0.6 28,022 + Ac3H11_1340 0.71 +1.1 28,022 + Ac3H11_1340 0.71 -0.5
Or see this region's nucleotide sequence