Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30770 and AZOBR_RS30775 are separated by 4 nucleotides
AZOBR_RS30770: AZOBR_RS30770 - carbon-nitrogen hydrolase, at 264,303 to 265,109
_RS30770
AZOBR_RS30775: AZOBR_RS30775 - agmatinase, at 265,114 to 266,169
_RS30775
Position (kb) 264
265
266 Strain fitness (log2 ratio) -2
-1
0
1
2 at 263.849 kb on + strand at 263.951 kb on + strand at 264.304 kb on + strand at 264.327 kb on - strand at 264.343 kb on + strand at 264.344 kb on - strand at 264.520 kb on + strand, within AZOBR_RS30770 at 264.521 kb on - strand, within AZOBR_RS30770 at 264.583 kb on + strand, within AZOBR_RS30770 at 264.584 kb on - strand, within AZOBR_RS30770 at 264.671 kb on - strand, within AZOBR_RS30770 at 264.671 kb on - strand, within AZOBR_RS30770 at 264.830 kb on - strand, within AZOBR_RS30770 at 264.830 kb on - strand, within AZOBR_RS30770 at 264.866 kb on - strand, within AZOBR_RS30770 at 264.971 kb on - strand, within AZOBR_RS30770 at 265.214 kb on + strand at 265.373 kb on + strand, within AZOBR_RS30775 at 265.373 kb on + strand, within AZOBR_RS30775 at 265.374 kb on - strand, within AZOBR_RS30775 at 265.374 kb on - strand, within AZOBR_RS30775 at 265.475 kb on + strand, within AZOBR_RS30775 at 265.475 kb on + strand, within AZOBR_RS30775 at 265.475 kb on + strand, within AZOBR_RS30775 at 265.476 kb on - strand, within AZOBR_RS30775 at 265.476 kb on - strand, within AZOBR_RS30775 at 265.682 kb on + strand, within AZOBR_RS30775 at 265.745 kb on + strand, within AZOBR_RS30775 at 265.745 kb on + strand, within AZOBR_RS30775 at 265.745 kb on + strand, within AZOBR_RS30775 at 265.746 kb on - strand, within AZOBR_RS30775 at 265.746 kb on - strand, within AZOBR_RS30775 at 265.863 kb on - strand, within AZOBR_RS30775
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 263,849 + +0.2 263,951 + -0.4 264,304 + -0.7 264,327 - +1.1 264,343 + +0.2 264,344 - +0.0 264,520 + AZOBR_RS30770 0.27 +0.0 264,521 - AZOBR_RS30770 0.27 +0.7 264,583 + AZOBR_RS30770 0.35 +0.9 264,584 - AZOBR_RS30770 0.35 +0.6 264,671 - AZOBR_RS30770 0.46 +2.3 264,671 - AZOBR_RS30770 0.46 +0.0 264,830 - AZOBR_RS30770 0.65 -2.4 264,830 - AZOBR_RS30770 0.65 -0.0 264,866 - AZOBR_RS30770 0.70 +0.6 264,971 - AZOBR_RS30770 0.83 +0.7 265,214 + +0.0 265,373 + AZOBR_RS30775 0.25 -0.2 265,373 + AZOBR_RS30775 0.25 -1.1 265,374 - AZOBR_RS30775 0.25 -0.1 265,374 - AZOBR_RS30775 0.25 +0.6 265,475 + AZOBR_RS30775 0.34 -0.7 265,475 + AZOBR_RS30775 0.34 +0.6 265,475 + AZOBR_RS30775 0.34 -0.6 265,476 - AZOBR_RS30775 0.34 +1.0 265,476 - AZOBR_RS30775 0.34 +0.5 265,682 + AZOBR_RS30775 0.54 -1.5 265,745 + AZOBR_RS30775 0.60 +0.3 265,745 + AZOBR_RS30775 0.60 -0.2 265,745 + AZOBR_RS30775 0.60 +0.0 265,746 - AZOBR_RS30775 0.60 -0.1 265,746 - AZOBR_RS30775 0.60 +0.4 265,863 - AZOBR_RS30775 0.71 -0.6
Or see this region's nucleotide sequence